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COVID-19 mRNA Vaccines: Lessons Learned from the Registrational Trials and Global Vaccination Campaign

Affiliations.

  • 1 Biology and Nutritional Epidemiology, Independent Research, Copper Hill, USA.
  • 2 Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, USA.
  • 3 Biostatistics and Epidemiology, Independent Research, Research Triangle Park, USA.
  • 4 Immunology and Public Health Research, Independent Research, Ottawa, CAN.
  • 5 Epidemiology and Biostatistics, Independent Research, Basel, CHE.
  • 6 Data Science, Independent Research, Los Angeles, USA.
  • 7 Cardiology, Epidemiology, and Public Health, McCullough Foundation, Dallas, USA.
  • 8 Cardiology, Epidemiology, and Public Health, Truth for Health Foundation, Tucson, USA.
  • PMID: 38274635
  • PMCID: PMC10810638
  • DOI: 10.7759/cureus.52876

Retraction in

  • Retraction: COVID-19 mRNA Vaccines: Lessons Learned from the Registrational Trials and Global Vaccination Campaign. Mead MN, Seneff S, Wolfinger R, Rose J, Denhaerynck K, Kirsch S, McCullough PA. Mead MN, et al. Cureus. 2024 Feb 26;16(2):r137. doi: 10.7759/cureus.r137. eCollection 2024 Feb. Cureus. 2024. PMID: 38414517 Free PMC article.

Our understanding of COVID-19 vaccinations and their impact on health and mortality has evolved substantially since the first vaccine rollouts. Published reports from the original randomized phase 3 trials concluded that the COVID-19 mRNA vaccines could greatly reduce COVID-19 symptoms. In the interim, problems with the methods, execution, and reporting of these pivotal trials have emerged. Re-analysis of the Pfizer trial data identified statistically significant increases in serious adverse events (SAEs) in the vaccine group. Numerous SAEs were identified following the Emergency Use Authorization (EUA), including death, cancer, cardiac events, and various autoimmune, hematological, reproductive, and neurological disorders. Furthermore, these products never underwent adequate safety and toxicological testing in accordance with previously established scientific standards. Among the other major topics addressed in this narrative review are the published analyses of serious harms to humans, quality control issues and process-related impurities, mechanisms underlying adverse events (AEs), the immunologic basis for vaccine inefficacy, and concerning mortality trends based on the registrational trial data. The risk-benefit imbalance substantiated by the evidence to date contraindicates further booster injections and suggests that, at a minimum, the mRNA injections should be removed from the childhood immunization program until proper safety and toxicological studies are conducted. Federal agency approval of the COVID-19 mRNA vaccines on a blanket-coverage population-wide basis had no support from an honest assessment of all relevant registrational data and commensurate consideration of risks versus benefits. Given the extensive, well-documented SAEs and unacceptably high harm-to-reward ratio, we urge governments to endorse a global moratorium on the modified mRNA products until all relevant questions pertaining to causality, residual DNA, and aberrant protein production are answered.

Keywords: autoimmune; cardiovascular; covid-19 mrna vaccines; gene therapy products; immunity; mortality; registrational trials; risk-benefit assessment; sars-cov-2 (severe acute respiratory syndrome coronavirus -2); serious adverse events.

Copyright © 2024, Mead et al.

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Conflict of interest statement

Steve Kirsch is the founder of the Vaccine Safety Research Foundation or VSRF (vacsafety.org) but receives no income from this entity

Figure 1. Analysis of Pfizer trial’s weekly…

Figure 1. Analysis of Pfizer trial’s weekly mortality over a 33-week period

This representation of…

Figure 2. Charts illustrating Pfizer trial irregularities…

Figure 2. Charts illustrating Pfizer trial irregularities in reporting of COVID-19 cases and humoral immune…

Figure 3. Cleveland Clinic study showing increasing…

Figure 3. Cleveland Clinic study showing increasing COVID-19 cases with increasing mRNA vaccinations

Cleveland Clinic…

Figure 4. Cleveland Clinic study showing increased…

Figure 4. Cleveland Clinic study showing increased COVID-19 cases for subjects most "up to date"…

Figure 5. VAERS reports of autoimmune disease…

Figure 5. VAERS reports of autoimmune disease per million doses of COVID-19 mRNA (2021-2023) compared…

Figure 6. Factors contributing to COVID-19 mRNA…

Figure 6. Factors contributing to COVID-19 mRNA vaccine inefficacy

COVID-19 vaccines may lose efficacy in…

Figure 7. Myocarditis reports in VAERS Domestic…

Figure 7. Myocarditis reports in VAERS Domestic Data as of September 29, 2023, plotted by…

Figure 8. Registrational trial for Pfizer, projected…

Figure 8. Registrational trial for Pfizer, projected three-year mortality If the six-month Pfizer trial had…

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Current challenges of vaccination in fish health management.

vaccines research articles

Simple Summary

1. introduction, 2. literature review process, 3. need for fish vaccines, 3.1. status of aquaculture products, 3.2. an emergency need for fish vaccines, 4. developments of commercially available vaccines and experimental available vaccines, 4.1. early works on fish vaccination, 4.2. properties of fish vaccines and the vaccination process, 4.3. types of fish vaccines, 4.3.1. whole-cell vaccines, 4.3.2. attenuated vaccines, 4.3.3. recombinant vaccines, 4.3.4. synthetic peptide vaccines, 4.3.5. dna vaccines, 4.3.6. mucosal vaccinations, 4.3.7. plant-based edible vaccines, 4.3.8. nanoparticle-based vaccine, 4.4. advancements in vaccine development, 5. contemporary need for vaccines in fish, a growing field of research, 6. fish vaccine production against various pathogens, 6.1. nocardiosis, 6.2. bacterial hemolytic jaundice, 6.3. bacterial coldwater disease, 6.4. erythrocyte inclusion body syndrome, 6.5. parasitosis, 6.6. vaccines other than inactivated vaccines, 6.7. autogenous vaccines, 7. plant-derived fish vaccines—a new perspective in immunology, 7.1. advantages of plant-derived fish vaccines, 7.2. prospective plant-derived fish vaccines, 8. updates on strategies to develop fish vaccines, 9. conclusions, author contributions, institutional review board statement, informed consent statement, data availability statement, acknowledgments, conflicts of interest.

  • WHO. Immunization, Vaccines and Biologicals. 2023. Available online: https://www.who.int/teams/immunization-vaccines-and-biologicals (accessed on 2 February 2023).
  • Grace, D.; Gilbert, J.; Randolph, T.; Kang’ethe, E. The multiple burdens of zoonotic disease and an Ecohealth approach to their assessment. Trop. Anim. Health Prod. 2012 , 44 , 67–73. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Lurie, N.; Manolio, T.; Paterson, A.P.; Collins, F.; Frieden, T. Research as a part of public health emergency response. N. Eng. J. Med. 2013 , 368 , 1251–1255. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Monath, T.P. Vaccines against diseases transmitted from animals to humans: A one health paradigm. Vaccine 2013 , 31 , 5321–5338. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Taksdal, T.; Stangeland, K.; Dannevig, B.H. Induction of infectious pancreatic necrosis (IPN) in Atlantic salmon Salmo salar and brook trout Salvelinus fontinalis by bath challenge of fry with infectious pancreatic necrosis virus (IPNV) serotype Sp. Dis. Aquat. Organ. 1997 , 28 , 39–44. [ Google Scholar ] [ CrossRef ]
  • Bebak, J.; McAllister, P.E.; Smith, G. Infectious pancreatic necrosis virus: Transmission from infectious to susceptible rainbow trout fry. J. Aquat. Anim. Health 1998 , 10 , 287–293. [ Google Scholar ] [ CrossRef ]
  • Rahman, M.T.; Sobur, M.A.; Islam, M.S.; Ievy, S.; Hossain, M.J.; El Zowalaty, M.E.; Rahman, A.T.; Ashour, H.M. Zoonotic Diseases: Etiology, Impact, and Control. Microorganisms 2020 , 8 , 1405. [ Google Scholar ] [ CrossRef ]
  • Ziarati, M.; Zorriehzahra, M.J.; Hassantabar, F.; Mehrabi, Z.; Dhawan, M.; Sharun, K.; Emran, T.B.; Dhama, K.; Chaicumpa, W.; Shamsi, S. Zoonotic diseases of fish and their prevention and control. Vet. Q. 2022 , 42 , 95–118. [ Google Scholar ] [ CrossRef ]
  • Rupprecht, C.E.; Hanlon, C.A.; Blanton, J.; Manangan, J.; Morrill, P.; Murphy, S.; Niezgoda, M.; Orciari, L.A.; Schumacher, C.L.; Dietzschold, B. Oral vaccination of dogs with recombinant rabies virus vaccines. Virus Res. 2005 , 111 , 101–105. [ Google Scholar ] [ CrossRef ]
  • Perkins, S.D.; Smither, S.J.; Atkins, H.S. Towards a Brucella vaccine for humans. FEMS Microbiol. Rev. 2010 , 4 , 379–394. [ Google Scholar ] [ CrossRef ]
  • Adams, A. Progress, challenges and opportunities in fish vaccine development. Fish Shellfish Immunol. 2019 , 90 , 210–214. [ Google Scholar ] [ CrossRef ]
  • Holsman, K.K.; Haynie, A.C.; Hollowed, A.B.; Reum, J.C.P.; Aydin, K.; Hermann, A.J.; Cheng, W.; Faig, A.; Ianelli, J.N.; Kearney, K.A. Ecosystem-Based Fisheries Management Forestalls Climate-Driven Collapse. Nat. Commun. 2020 , 11 , 4579. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Roth, J.A. Veterinary vaccines and their importance to animal health and public health. Procedia Vaccinol. 2011 , 5 , 127–136. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • NAOH. National Office of Animal Health, Vaccination for Animals: An Overview. 2017. Available online: http://noah.co.uk (accessed on 2 February 2023).
  • Du, Y.; Hu, X.; Miao, L.; Chen, J. Current status and development prospects of aquatic vaccines. Front. Immunol. 2022 , 13 , 1040336. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Qian, M.-B.; Keiser, J.; Utzinger, J.; Zhou, X.-N. Clonorchiasis and opisthorchiasis: Epidemiology, transmission, clinical features, morbidity, diagnosis, treatment, and control. Clin. Microbiol. Rev. 2024 , 37 , e0000923. [ Google Scholar ] [ CrossRef ]
  • Ma, J.; Bruce, T.J.; Jones, E.M.; Cain, K.D. A Review of Fish Vaccine Development Strategies: Conventional Methods and Modern Biotechnological Approaches. Microorganisms 2019 , 7 , 569. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Lillehaug, A. Vaccination Strategies and Procedures. In Fish Vaccination , 1st ed.; Lillehaug, A.G.R., Evensen, Ø., Eds.; John Wiley and Sons Inc.: Oxford, UK, 2014; pp. 141–150. [ Google Scholar ]
  • Figueroa, C.; Torrealba, D.; Morales-Lange, B.; Mercado, L.; Dixon, B.; Conejeros, P.; Silva, G.; Soto, C.; Gallardo, J.A. Commercial Vaccines Do Not Confer Protection against Two Genogroups of Piscirickettsia salmonis , LF-89 and EM-90, in Atlantic Salmon. Biology 2022 , 11 , 993. [ Google Scholar ] [ CrossRef ]
  • He, T.; Zhang, Y.-Z.; Gao, L.-H.; Miao, B.; Zheng, J.-S.; Pu, D.-C.; Zhang, Q.-Q.; Zeng, W.-W.; Wang, D.-S.; Su, S.-Q.; et al. Identification and pathogenetic study of tilapia lake virus (TiLV) isolated from naturally diseased tilapia. Aquaculture 2023 , 565 , 739166. [ Google Scholar ] [ CrossRef ]
  • Kembou-Ringert, J.E.; Steinhagen, D.; Readman, J.; Daly, J.M.; Adamek, M. Tilapia Lake Virus Vaccine Development: A Review on the Recent Advances. Vaccines 2023 , 11 , 251. [ Google Scholar ] [ CrossRef ]
  • NSC. History of New England’s Ground Fish Fishery & Management. 2023. Available online: https://northeastseafoodcoalition.org/fishery-101/history/#:~:text=Before%20the%20Magnuson%20was%20implemented,New%20England%20Fishery%20Management%20Council (accessed on 2 February 2023).
  • OWD. Seafood and fish production, World. 2023. Available online: https://ourworldindata.org/grapher/seafood-and-fish-production-thousand-tonnes (accessed on 2 February 2023).
  • OECD. Food & Nations, A.O. of the U. OECD-FAO Agricultural Outlook 2020–2029. OECD iLibrary . 2020. Available online: https://www.oecd-ilibrary.org/agriculture-and-food/oecd-fao-agricultural-outlook-2020-2029_1112c23b-en (accessed on 2 February 2023). [ CrossRef ]
  • FAO. The State of World Fisheries and Aquaculture 2022-Towards Blue Transformation ; FAO: Rome, Italy, 2022; Available online: https://openknowledge.fao.org/items/11a4abd8-4e09-4bef-9c12-900fb4605a02 (accessed on 2 February 2023). [ CrossRef ]
  • Naylor, R.L.; Kishore, A.; Sumaila, U.R.; Issifu, I.; Hunter, B.P.; Belton, B.; Bush, S.R.; Cao, L.; Gelcich, S.; Gephart, J.A. Blue food demand across geographic and temporal scales. Nat. Commun. 2021 , 12 , 5413. [ Google Scholar ] [ CrossRef ]
  • Pollard, A.J.; Bijker, E.M. A guide to vaccinology: From basic principles to new developments. Nat. Rev. 2021 , 21 , 83–100. [ Google Scholar ] [ CrossRef ]
  • Aida, V.; Pliasas, V.C.; Neasham, P.J.; North, J.F.; McWhorter, K.L.; Glover, S.R.; Kyriakis, C.S. Novel technologies in veterinary medicine: A Herald to human medicine vaccines. Front. Vet. Sci. 2021 , 8 , 654289. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Panda, F.; Pati, S.G.; Das, K.; Samanta, L.; Sahoo, D.K.; Paital, B. Biochemical and molecular responses of the freshwater snail Pila sp. To environmental pollutants, abiotic, and biotic stressors. Front. Environ. Sci. 2022 , 10 , 1033049. [ Google Scholar ] [ CrossRef ]
  • Bal, A.; Panda, F.; Pati, S.G.; Anwar, T.A.; Das, K.; Paital, B. Influence of anthropogenic activities on redox regulation and oxidative stress responses in different phyla of animals in coastal water via change in salinity. Water 2022 , 14 , 4026. [ Google Scholar ] [ CrossRef ]
  • Chhabria, S.; Mathur, S.; Vadakan, S.; Sahoo, D.K.; Mishra, P.; Paital, B. A review on Phytochemical and Pharmacological Facets of Tropical Ethnomedicinal Plants as Reformed DPP-IV Inhibitors to Regulate Incretin Activity. Front. Endocrinol. 2022 , 13 , 1027237. [ Google Scholar ] [ CrossRef ]
  • Serkissian, M. Seven of the Biggest Problems Facing Fish in Our Oceans & Raquo; Marine Conservation Institute. Available online: https://marine-conservation.org/on-the-tide/seven-of-the-biggest-problems-facing-fish-in-our-oceans/ (accessed on 31 January 2023).
  • Snieszko, S.F. Columnaris disease of fishes. USFWS Fish Leafl. 1958 , 46 , 1–3. [ Google Scholar ]
  • Amend, D.F.; Ross, A.J. Experimental control of columnaris disease with a new nitrofuran drug, P-7138. Prog. Fish-Cult. 1970 , 32 , 19–25. [ Google Scholar ] [ CrossRef ]
  • Ross, A.J. In vitro studies with nifurpirinol (P-7138) and bacterial fish pathogens. Prog. Fish-Cult. 1972 , 34 , 18–20. [ Google Scholar ] [ CrossRef ]
  • Shiraki, K.; Miyamoto, F.; Sato, T.; Sonezaki, I.; Yano, K. Studies on a New Chemotherapautic Agent Nifurprazine (HB-115) against Fishinfectious Diseases-Part I. Fish Pathol. 1970 , 4 , 130–137. [ Google Scholar ] [ CrossRef ]
  • Deufel, J. Prophylactic measures against bacterial diseases of salmonid fry (Prophylaktische Massnahmen gegen bakterielle Erkrankungen der Salmonidenbrut). Osterr Fisch 1974 , 27 , 1–5. [ Google Scholar ]
  • Endo, T.; Ogishima, K.; Hayasaka, H.; Kaneko, S.; Ohshima, S. Application of oxolinic acid as a chemotherapeutic agent against infectious diseases in fishes-I. Antibacterial activity, chemotherapeutic effects and pharmacokinetics of oxolinic acid in fishes. Bull. Jpn. Soc. Sci. Fish. 1973 , 39 , 165–171. [ Google Scholar ] [ CrossRef ]
  • Soltani, M.; Shanker, S.; Munday, B.L. Chemotherapy of Cytophaga/Flexibacter-like bacteria (CFLB) nfections in fish: Studies validating clinical efficacies of selected antimicrobials. J. Fish Dis. 1995 , 18 , 555–565. [ Google Scholar ] [ CrossRef ]
  • Lilley, J.H.; Callinan, R.B.; Chinabut, S.; Kanchanakhan, S.; Macrae, I.H.; Phillips, M.J. Epizootic Ulcerative Syndrome (EUS) Technical Handbook ; Aquatic Animal Health Research Institute: Bangkok, Thailand, 1998. [ Google Scholar ]
  • Ahne, W.; Bjorklund, H.V.; Essbauer, S.; Fijan, N.; Kurath, G.; Winton, J.R. Spring viremia of carp (SVC). Dis. Aquat. Organ. 2002 , 52 , 261–272. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Dixon, P.F. Virus diseases of cyprinids. In Fish Diseases ; Eiras, J.C., Segner, H., Wahli, T., Kapoor, B.G., Eds.; Science Publishers: Enfield, NH, USA, 2008; Volume 1, pp. 87–184. [ Google Scholar ]
  • Emmenegger, E.J.; Kurath, G. DNA Vaccine Protects Ornamental Koi ( Cyprinus carpio Koi) against North American Spring Viremia of Carp Virus. Vaccine 2008 , 26 , 6415–6421. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Noga, E.J. Lymphocystis in Fish Disease: Diagnosis and Treatment , 2nd ed.; Wiley-Blackwell: Ames, IA, USA, 2010; pp. 171–173. [ Google Scholar ]
  • Wolf, K. Lymphocystis disease. In Fish Viruses and Fish Viral Diseases ; Cornell University Press: Ithaca, NY, USA, 1988; pp. 268–291. [ Google Scholar ]
  • Cusack, R.; Cone, D.K. A Review of Parasites as Vectors of Viral and Bacterial Diseases of Fish. J. Fish Dis. 1986 , 9 , 169–171. [ Google Scholar ] [ CrossRef ]
  • GOI. Govt. of India Handbook on Fisheries Statistics, Ministry of Fisheries, Animal Husbandry and Dairy, Government of India. 2021. Available online: https://dof.gov.in/sites/default/files/2021-02/Final_Book.pdf (accessed on 2 February 2023).
  • Masifundise. The Importance of Fish to Man: Not Just a Food Source 2016. Available online: https://www.masifundise.org/the-importance-of-fish-to-man-not-just-a-food-source/ (accessed on 31 January 2023).
  • McLoughlin, M.F.; Graham, D.A. Alphavirus Infections in Salmonids? A Review. J. Fish Dis. 2007 , 30 , 511–531. [ Google Scholar ] [ CrossRef ]
  • Sneeringer, S.; Bowman, M.; Clancy, M. The US and EU Animal Pharmaceutical Industries in the Age of Antibiotic Resistance. In USDA Economic Research Service Report Number 264 ; USDA: Washington, DC, USA, 2019. [ Google Scholar ]
  • Horzinek, M.C.; Schijns, V.E.C.J.; Denis, M.; Desmettre, P.; Babiuk, L.A. General description of vaccines. In Veterinary Vaccinology ; Pastoret, P.P., Blancou, J., Vannier, P., Verschueren, C., Eds.; Elsevier Press: Amsterdam, The Netherlands, 1997; pp. 132–152. [ Google Scholar ]
  • Dadar, M.; Dhama, K.; Vakharia, V.N.; Hoseinifar, S.H.; Karthik, K.; Tiwari, R.; Khandia, R.; Munjal, A.; Salgado-Miranda, C.; Joshi, S.K. Advances in Aquaculture Vaccines Against Fish Pathogens: Global Status and Current Trends. Rev. Fish. Sci. Aquac. 2017 , 25 , 184–217. [ Google Scholar ] [ CrossRef ]
  • DFO. Efficacy of the APEX Vaccine in Atlantic Salmon Subjected to an IHNV Exposure Simulating Natural and/or Elevated Field Challenges. Available online: https://www.dfo-mpo.gc.ca/aquaculture/rp-pr/acrdp-pcrda/projects-projets/P-07-04-010-eng.html (accessed on 2 February 2023).
  • PHARMAQ Seguridad y Apoyo. Available online: https://www.pharmaq.com/es/pharmaq/ (accessed on 19 January 2023).
  • HOME-MSD Animal Health Norge (Msd-Animal-Health.No). Available online: https://www.msd-animal-health.no/ (accessed on 21 January 2023).
  • Tammas, I.; Bitchava, K.; Gelasakis, A.I. Transforming Aquaculture through Vaccination: A Review on Recent Developments and Milestones. Vaccines 2024 , 12 , 732. [ Google Scholar ] [ CrossRef ]
  • Elanco South Africa. Available online: https://www.elanco.no/index (accessed on 24 January 2023).
  • Aquavac-Vaccines Against Fish Diseases. Formerly Norvax. Available online: https://www.aquavac-vaccines.com/ (accessed on 16 January 2023).
  • Leiva-Rebollo, R.; Labella, A.M.; Gémez-Mata, J.; Castro, D.; Borrego, J.J. Fish Iridoviridae: Infection, vaccination and immune response. Vet Res. 2024 , 55 , 88. [ Google Scholar ] [ CrossRef ]
  • Dhar, A.K.; Manna, S.K.; Thomas Allnutt, F.C. Viral Vaccines for Farmed Finfish. Virus Dis. 2014 , 25 , 1–17. [ Google Scholar ] [ CrossRef ]
  • Busch, R.A. Polyvalent vaccines in fish: The interactive effects of multiple antigens. Dev. Biol. Stand. 1997 , 90 , 245–256. [ Google Scholar ]
  • Stuart, N. Treatment of Fish Disease. Veter. Rec. 1983 , 112 , 173–177. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Hegde, A.; Kabra, S.; Basawa, R.M.; Khile, D.A.; Abbu, R.U.F.; Thomas, N.A.; Manickam, N.B.; Raval, R. Bacterial diseases in marine fish species: Current trends and future prospects in disease management. World J. Microbiol. Biotechnol. 2023 , 39 , 317. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Sommerset, I.; Krossøy, B.; Biering, E.; Frost, P. Vaccines for Fish in Aquaculture. Expert Rev. Vaccines 2005 , 4 , 89–101. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Mondal, H.; Thomas, J. A Review on the Recent Advances and Application of Vaccines against Fish Pathogens in Aquaculture. Aquac. Int. 2022 , 30 , 1971–2000. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Nayak, S.K. Current Prospects and Challenges in Fish Vaccine Development in India with Special Reference to Aeromonas hydrophila Vaccine. Fish Shellfish Immunol. 2020 , 100 , 283–299. [ Google Scholar ] [ CrossRef ]
  • Mai, T.T.; Kayansamruaj, P.; Soontara, C.; Kerddee, P.; Nguyen, H.; Senapin, S.; Costa, J.Z.; Thompson, K.D.; Rodkhum, C.; Dong, H.T. Immunization of Nile Tilapia ( Oreochromis niloticus ) Broodstock with Tilapia Lake Virus (TiLV) Inactivated Vaccines Elicits Protective Antibody and Passive Maternal Antibody Transfer. Vaccines 2022 , 10 , 167. [ Google Scholar ] [ CrossRef ]
  • Shefat, S.H.T. Vaccines for infectious bacterial and viral diseases of fish. J. Bacteriol. Infect. Dis. 2018 , 2 , 1–5. [ Google Scholar ]
  • Razali, S.A.; Shamsir, M.S.; Ishak, N.F.; Low, C.F.; Azemin, W.A. Riding the wave of innovation: Immunoinformatics in fish disease control. PeerJ 2023 , 11 , e16419. [ Google Scholar ] [ CrossRef ]
  • Gudding, R.; Van Muiswinkel, W.B. A history of fish vaccination: Science-based disease prevention in aquaculture. Fish Shellfish Immunol. 2013 , 35 , 1683–1688. [ Google Scholar ] [ CrossRef ]
  • Newman, S.G. Bacterial vaccines for fish. Annu. Rev. Fish Dis. 1992 , 3 , 145–185. [ Google Scholar ] [ CrossRef ]
  • Plant, K.P.; LaPatra, S.E. Advances in fish vaccine delivery. Dev. Comp. Immunol. 2011 , 35 , 1256–1262. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Tafalla, C.; Bogwald, J.; Dalmo, R.A. Adjuvants and immunostimulants in fish vaccines: Current knowledge and future perspectives. Fish Shellfish Immunol. 2013 , 35 , 1740–1750. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Embregts, C.W.E.; Forlenza, M. Oral Vaccination of Fish: Lessons from Humans and Veterinary Species. Dev. Comp. Immunol. 2016 , 64 , 118–137. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Tafalla, C.; Bogwald, J.; Dalmo, R.A.; Munang’andu, H.M.; Evensen, O. Adjuvants in fish vaccines. In Fish Vaccination , 1st ed.; Gudding, R., Lillehaug, A., Evensen, Ø., Eds.; John. Wiley & Sons, Inc.: New York, NY, USA, 2014; pp. 68–84. [ Google Scholar ] [ CrossRef ]
  • Magadan, S.; Jouneau, L.; Boudinot, P.; Salinas, I. Nasal Vaccination Drives Modifications of Nasal and Systemic Antibody Repertoires in Rainbow Trout. J. Immunol. 2019 , 203 , 1480–1492. [ Google Scholar ] [ CrossRef ]
  • Milligan, S.B.; Skalla, D.; Lawton, K. Promoters for Regulation of Gene Expression in Plant Roots. 2023. Available online: https://patents.google.com/patent/US20050010974A1/en?oq=US+patent+No+US+2005%2f0010974A1 (accessed on 29 January 2023).
  • Su, H.; Yakovlev, I.A.; van Eerde, A.; Su, J.; Clarke, J.L. Plant-Produced Vaccines: Future Applications in Aquaculture. Front. Plant Sci. 2021 , 12 , 718775. [ Google Scholar ] [ CrossRef ]
  • Nagaraju, V.T. Nanovaccines in Aquaculture. Arch. Nanomed. Open Access J. 2019 , 2 , 153–159. [ Google Scholar ]
  • Andreoni, F.; Amagliani, G.; Magnani, M. Selection of Vaccine Candidates for Fish Pasteurellosis Using Reverse Vaccinology and an In Vitro Screening Approach. In Vaccine Design, Book Series-Methods in Molecular Biology ; Thomas, S., Ed.; Humana: New York, NY, USA, 2016; Volume 1404, pp. 181–192. [ Google Scholar ] [ CrossRef ]
  • Rao, Y.; Su, J. Insights into the Antiviral Immunity against Grass Carp (Ctenopharyngodon idella) Reovirus (GCRV) in Grass Carp. J. Immunol. Res. 2015 , 2015 , 670437. [ Google Scholar ] [ CrossRef ]
  • Miccoli, A.; Manni, M.; Picchietti, S.; Scapigliati, G. State-of-the-Art Vaccine Research for Aquaculture Use: The Case of Three Economically Relevant Fish Species. Vaccines 2021 , 9 , 140. [ Google Scholar ] [ CrossRef ]
  • Irshath, A.A.; Rajan, A.P.; Vimal, S.; Prabhakaran, S.; Ganesan, R. Bacterial Pathogenesis in Various Fish Diseases: Recent Advances and Specific Challenges in Vaccine Development. Vaccines 2023 , 11 , 470. [ Google Scholar ] [ CrossRef ]
  • Lan, N.G.T.; Dong, H.T.; Shinn, A.P.; Vinh, N.T.; Senapin, S.; Salin, K.R.; Rodkhum, C. Review of current perspectives and future outlook on bacterial disease prevention through vaccination in Asian seabass ( Lates calcarifer ). J. Fish Dis. 2024 , 47 , e13964. [ Google Scholar ] [ CrossRef ]
  • Tamer, C.; Cavunt, A.; Durmaz, Y.; Ozan, E.; Kadi, H.; Kalayci, G.; Ozkan, B.; Isidan, H.; Albayrak, H. Inactivated infectious pancreatic necrosis virus (IPNV) vaccine and E.coli-expressed recombinant IPNV-VP2 subunit vaccine afford protection against IPNV challenge in rainbow trout. Fish Shellfish Immunol. 2021 , 115 , 205–211. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Bootland, L.M.; Dobos, P.; Stevenson, R.M.W. Immunization of adult brook trout, Salvelinus fontinalis, fails to prevent the infectious pancreatic necrosis virus (IPNV) carrier state. J. Fish Dis. 1995 , 18 , 449–458. [ Google Scholar ]
  • Maret, J.J. Virulence Characteristics of Infectious Pancreatic Necrosis Virus (lPNV) in Brook Trout, Salvelinus fontinalis , Fry. Master’s Thesis, Oregon State University, Corvallis, OR, USA, 1997. [ Google Scholar ]
  • Collins, C.; Lorenzen, N.; Collet, B. DNA vaccination for finfish aquaculture. Fish Shellfish Immunol. 2019 , 85 , 106–125. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Muñoz-Atienza EDiaz-Rosales, P.; Tafalla, C. Systemic and mucosal B and T cell responses upon mucosal vaccination of teleost fish. Front. Immunol. 2021 , 11 , 622377. [ Google Scholar ] [ CrossRef ]
  • Mahendran, R.; Jeyabaskar, S.; Michael, D.; Vincent Paul, A.; Sitharaman, G. Computer-Aided Vaccine Designing Approach against Fish Pathogens Edwardsiella Tarda and Flavobacterium Columnare Using Bioinformatics Softwares. Drug Des. Dev. Ther. 2016 , 1703–1714. [ Google Scholar ] [ CrossRef ]
  • Briggs, M.; Funge-Smith, S.; Subasinghe, R.; Phillips, M. Introductions and Movement of Penaeus vannamei and Penaeus stylirostris in Asia and the Pacific ; FAO: Bangkok, Thailand, 2004; RAP Publication 2004/10. [ Google Scholar ]
  • Mishra, S.S.; Rakesh, D.; Dhiman, M.; Choudhary, P.; Debbarma, J.; Sahoo, S.N.; Barua, A.; Giri, B.S.; Ramesh, R.; Ananda, K.; et al. Present status of fish disease management in freshwater aquaculture in India: State-of-the-art-review. J. Aquac. Fish. 2017 , 1 , 003. [ Google Scholar ] [ CrossRef ]
  • Zdanowicz, M.; Mudryk, Z.J.; Perlinski, P. Abundance and antibiotic resistance of Aeromonas isolated from the water of three carp ponds. Vet. Res. Commun. 2020 , 44 , 9–18. [ Google Scholar ] [ CrossRef ]
  • Algammal, A.M.; Mabrok, M.; Sivaramasamy, E.; Youssef, F.M.; Atwa, M.H.; El-Kholy, A.W.; Hetta, H.F.; Hozzein, W.N. Emerging MDR- Pseudomonas aeruginosa in fish commonly harbor oprL and toxA virulence genes and blaTEM, blaCTX-M, and tetA antibiotic-resistance genes. Sci. Rep. 2020 , 10 , e15961. [ Google Scholar ] [ CrossRef ]
  • Hashish, E.; Merwad, A.; Elgaml, S.; Amer, A.; Kamal, H.; Elsadek, A.; Marei, A.; Sitohy, M. Mycobacterium marinum infection in fish and man: Epidemiology, pathophysiology and management; a review. Vet. Q. 2018 , 38 , 35–46. [ Google Scholar ] [ CrossRef ]
  • IASRI. Fish Diseases and Management. e-Krishi Shiksha. Available online: http://ecoursesonline.iasri.res.in (accessed on 2 February 2023).
  • Kim, C.H.; Leong, J.A. Fish viruses. Encyclop. Virol. 2004 , 558–568. [ Google Scholar ]
  • Bajpai, V.; Pragyan, D.; Suman, K.; Mohanty, J.; Sahoo, P.K. Viral diseases in Indian freshwater and marine water pisciculture. Curr. Sci. 2022 , 122 , 267–280. [ Google Scholar ] [ CrossRef ]
  • Nitika; Wei, J.; Hui, A.M. The Development of mRNA Vaccines for Infectious Diseases: Recent Updates. Infect. Drug Resist. 2021 , 14 , 5271–5285. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Wang, Y.; Zhang, Z.; Luo, J.; Han, X.; Wei, Y.; Wei, X. mRNA vaccine: A potential therapeutic strategy. Mol. Cancer 2021 , 16 , 20–33. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Nisini, R.; Poerio, N.; Mariotti, S.; De Santis, F.; Fraziano, M. The Multirole of Liposomes in Therapy and Prevention of Infectious Diseases. Front. Immunol. 2018 , 9 , 155. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Bo, Y.; Wang, H. Materials based vaccines for infectious diseases. Wires Nanomedic. Wiley Interdiscip. Rev. Nanomed. Nanobiotechnology 2022 , 14 , e1824. [ Google Scholar ] [ CrossRef ]
  • Holvold, L.B.; Myhr, A.I.; Dalmo, R.A. Strategies and hurdles using DNA vaccines to fish. Vet. Res. 2014 , 45 , 21. [ Google Scholar ] [ CrossRef ]
  • Chang, C.J. Immune sensing of DNA and strategies for fish DNA vaccine development. Fish Shellfish Immunol. 2020 , 101 , 252–260. [ Google Scholar ] [ CrossRef ]
  • Coll, M.; Carreras, M.; Ciércoles, C.; Cornax, M.-J.; Gorelli, G.; Morote, E.; Saez, R. Assessing fishing and marine biodiversity changes using fishers’ perceptions: The Spanish Mediterranean and Gulf of Cadiz case study. PLoS ONE 2014 , 9 , e85670. [ Google Scholar ] [ CrossRef ]
  • Mugimba, K.K.; Byarugaba, D.K.; Mutoloki, S.; Evensen, O.; Munang’andu, H.M. Challenges and Solutions to Viral Diseases of Finfish in Marine Aquaculture. Pathogens 2021 , 10 , 673. [ Google Scholar ] [ CrossRef ]
  • Kageyama, A.; Yazawa, K.; Ishikawa, J.; Hotta, K.; Nishimura, K.; Mikami, Y. Nocardial Infections in Japan from 1992 to 2001, Including the First Report of Infection by Nocardia transvalensis . Eur. J. Epidemiol. 2004 , 19 , 383–389. [ Google Scholar ] [ CrossRef ]
  • Singh, A.; Chhina, D.; Soni, R.K.; Kakkar, C.; Sidhu, U.S. Clinical spectrum and outcome of pulmonary nocardiosis: 5-year experience. Lung India: Official organ of Ind. Chest Soc. 2016 , 33 , 398–403. [ Google Scholar ]
  • Vendrell, D.; Balcázar, J.L.; Ruiz-Zarzuela, I.; de Blas, I.; Gironés, O.; Múzquiz, J.L. Lactococcus garvieae in fish: A review. Comp. Immunol. Microbiol. Infect. Dis. 2006 , 29 , 177–198. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Shrestha, S.; Kanellis, J.; Korman, T.; Polkinghorne, K.R.; Brown, F.; Yii, M.; Kerr, P.G.; Mulley, W. Different faces of Nocardia infection in renal transplant recipients. Nephrology 2016 , 21 , 254–260. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Kariya, T.; Kubota, S.; Nakamura, Y.; Kira, K. Nocardial infection in cultured yellowtails ( Seriola quinqueruiata and S. purpurascens )—I. Bacteriological study. Fish Pathol. 1968 , 3 , 16–23. (In Japanese) [ Google Scholar ] [ CrossRef ]
  • Shimahara, Y.; Yasuda, H.; Nakamura, A.; Itami, T.; Yoshida, T. Detection of antibody response against Nocardia seriolae by enzyme-linked immunosorbent assay (ELISA) and a preliminary vaccine trial in yellowtail Seriola quinqueradiata . Bull. Eur. Assoc. Fish Pathol. 2005 , 25 , 270–275. [ Google Scholar ]
  • Kato, G.; Yamashita, K.; Kondo, H.; Hirono, I. Protective efficacy and immune responses induced by a DNA vaccine encoding codonoptimized PPA1 against Photobacterium damselae subsp. Piscicida in Japanese flounder. Vaccine 2015 , 33 , 1040–1045. [ Google Scholar ]
  • Nash, A.A.; Dalziel, R.G.; Fitzgerald, J.R. Chapter 8 Mechanisms of Cell and Tissue Damage. In Mims’ Pathogenesis of Infectious Disease , 6th ed.; Academic Press: Cambridge, MA, USA, 2015; pp. 171–231. ISBN 978-0-12-397188-3. [ Google Scholar ]
  • Lampel, K.A.; Formal, S.B.; Maurelli, A.T. A Brief History of Shigella. EcoSal. Plus. 2018 , 8 , 10–1128. [ Google Scholar ] [ CrossRef ]
  • Matsuyama, T.; Fukuda, Y.; Sakai, T.; Tanimoto, N.; Nakanishi, M.; Nakamura, Y.; Takano, T.; Nakayasu, C. Clonal structure in Ichthyobacterium seriolicida , the causative agent of bacterial haemolytic jaundice in yellowtail, Seriola quinqueradiata , inferred from molecular epidemiological analysis. J. Fish Dis. 2017 , 40 , 1065–1075. [ Google Scholar ] [ CrossRef ]
  • Abdelsalam, M.; Asheg, A.; Eissa, A.E. Streptococcus dysgalactiae : An emerging pathogen of fishes and mammals. Int. J. Vet. Sci. Med. 2013 , 1 , 1–6. [ Google Scholar ] [ CrossRef ]
  • Takano, T.; Nakamura, Y.; Matsuyama, T.; Sakai, T.; Shigenobu, Y.; Sugaya, T.; Yasuike, M.; Fujiwara, A.; Kondo, H.; Hirono, I.; et al. Complete Genome Sequence of Ichthyobacterium seriolicida JBKA-6T, Isolated from Yellowtail ( Seriola quinqueradiata ) Affected by Bacterial Hemolytic Jaundice. Genome Announc. 2017 , 5 , e01574-16. [ Google Scholar ] [ CrossRef ]
  • Castillo, D.; Higuera, G.; Villa, M.; Middelboe, M.; Dalsgaard, I.; Madsen, L.; Espejo, R.T. Diversity of Flavobacterium psychrophilum and the potential use of its phages for protection against bacterial cold water disease in salmonids. J. Fish Dis. 2012 , 35 , 193–201. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Garcia, C.; Pozet, F.; Michel, C. Standardization of experimental infection with Flavobacterium psychrophilum , the agent of rainbow trout Oncorhynchus mykiss fry syndrome. Dis. Aquatic. Org. 2000 , 42 , 191–197. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Wakabayashi, H.; Horiuchi, M.; Bunya, T.; Hoshiai, G. Outbreaks of cold-water disease in coho salmon in Japan. Fish Pathol. 1991 , 26 , 211–212. (In Japanese) [ Google Scholar ] [ CrossRef ]
  • Iida, Y.; Mizokami, A. Outbreaks of coldwater disease in wild ayu and pale chub. Fish Pathol. 1996 , 31 , 157–164. [ Google Scholar ] [ CrossRef ]
  • Rochat, T.; Calvez, S.; Dalsgaard, I.; Madsen, L.; Calteau, A.; Lunazzi, A.; Nicolas, P.; Wiklund, T.; Bernardet, J.; Duchaud, E. Genomic Characterization of Flavobacterium psychrophilum Serotypes and Development of a Multiplex PCR-Based Serotyping Scheme. Front. Microbiol. 2017 , 8 , 1752. [ Google Scholar ] [ CrossRef ]
  • Duchaud, E.; Rochat, T.; Habib, C.; Barbier, P.; Loux, V.; Guérin, C.; Dalsgaard, I.; Madsen, L.; Nilsen, H.; Sundell, K.; et al. Genomic Diversity and Evolution of the Fish Pathogen Flavobacterium psychrophilum . Front. Microbiol. 2018 , 9 , 138. [ Google Scholar ] [ CrossRef ]
  • Keller, M.A.; Stiehm, E.R. Passive Immunity in Prevention and Treatment of Infectious Diseases. Clin. Microbiol. Rev. 2000 , 13 , 602–614. [ Google Scholar ] [ CrossRef ]
  • Gravningen, K.; Sakai, M.; Mishiba, T.; Fujimoto, T. The efficacy and safety of an oil-based vaccine against Photobacterium damsela subsp. Piscicida in yellowtail (Seriola quinqueradiata): A field study. Fish Shellfish Immunol. 2008 , 24 , 523–529. [ Google Scholar ]
  • Awate, S.; Babiuk, L.A.; Mutwiri, G. Mechanisms of Action of Adjuvants. Front. Immunol. 2013 , 4 , 114. [ Google Scholar ] [ CrossRef ]
  • Sarkar, I.; Garg, R.; van Drunen Littel-van den Hurk, S. Selection of adjuvants for vaccines targeting specific pathogens. Expert Rev. Vac. 2019 , 18 , 505–521. [ Google Scholar ] [ CrossRef ]
  • Rahman, M.; Ototake, M.; Nakanishi, T. Water-soluble adjuvants enhance the protective effect of Flavobacterium psychrophilum vaccines in ayu Plecoglossus altivelis . Fish Pathol. 2003 , 38 , 171–176. [ Google Scholar ] [ CrossRef ]
  • Nagai, T.; Lida, Y.; Yoneji, T. Field trials of a vaccine with water-soluble adjuvant for bacterial coldwater disease in ayu Plecoglossus altivelis . Fish Pathol. 2003 , 38 , 63–65. (In Japanese) [ Google Scholar ] [ CrossRef ]
  • Rhee, J.H. Current and New Approaches for Mucosal Vaccine Delivery. Mucos. Vac. 2020 , 325–356. [ Google Scholar ] [ CrossRef ]
  • Gómez, E.; Méndez, J.; Cascales, D.; Guijarro, J.A. Flavobacterium psychrophilum vaccine development: A difficult task. Microbial. Biotechnol. 2014 , 7 , 414–423. [ Google Scholar ] [ CrossRef ]
  • Dumetz, F.; Duchaud, E.; LaPatra, S.E.; Marrec, C.L.; Claverol, S.; Urdaci, C.; Hénaff, M.L. A Protective Immune Response Is Generated in Rainbow Trout by an OmpH-Like Surface Antigen (P18) of Flavobacterium psychrophilum . Appl. Environ. Microbiol. 2006 , 72 , 4845–4852. [ Google Scholar ]
  • Fux, R.; Arndt, D.; Langenmayer, M.C.; Schwaiger, J.; Ferling, H.; Fischer, N.; Indenbirken, D.; Grundhoff, A.; Dölken, L.; Adamek, M.; et al. Piscine Orthoreovirus 3 Is Not the Causative Pathogen of Proliferative Darkening Syndrome (PDS) of Brown Trout ( Salmo trutta fario ). Viruses 2019 , 11 , 112. [ Google Scholar ] [ CrossRef ]
  • Takano, T.; Nawata, A.; Sakai, T.; Matsuyama, T.; Ito, T.; Kurita, J.; Terashima, S.; Yasuike, M.; Nakamura, Y.; Fujiwara, A.; et al. Full-Genome Sequencing and Confirmation of the Causative Agent of Erythrocytic Inclusion Body Syndrome in Coho Salmon Identifies a New Type of Piscine Orthoreovirus. PLoS ONE 2016 , 11 , e0165424. [ Google Scholar ] [ CrossRef ]
  • Wessel, O.; Braaen, S.; Alarcon, M.; Haatveit, H.; Roos, N.; Markussen, T.; Tengs, T.; Dahle, M.; Rimstad, E. Infection with purified Piscine orthoreovirus demonstrates a causal relationship with heart and skeletal muscle inflammation in Atlantic salmon. PLoS ONE 2017 , 12 , e0183781. [ Google Scholar ] [ CrossRef ]
  • Olsen, A.; Hjortaas, M.; Tengs, T.; Hellberg, H.; Johansen, R. First description of a new disease in rainbow trout ( Oncorhynchus mykiss (Walbaum)) similar to heart and skeletal muscle inflammation (HSMI) and detection of a gene sequence related to piscine orthoreovirus (PRV). PLoS ONE 2015 , 10 , e0131638. [ Google Scholar ] [ CrossRef ]
  • Marcotte, H.; Hammarström, L. Passive Immunization: Toward Magic Bullets. Mucos. Immunol. 2015 , 2 , 1403–1434. [ Google Scholar ]
  • Haatveit, H.; Hodneland, K.; Braaen, S.; Hansen, E.; Nyman, I.; Dahle, M.; Frost, P.; Rimstad, E. DNA vaccine expressing the non-structural proteins of Piscine orthoreovirus delay the kinetics of PRV infection and induces moderate protection against heart-and skeletal muscle inflammation in Atlantic salmon ( Salmo salar ). Vaccine 2018 , 36 , 7599–7608. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Ogawa, K.; Bondad-Reantaso, M.; Fukudome, M.; Wakabayashi, H. Neobenedenia girellae (Hargis, 1955) Yamaguti, 1963 ( Monogenea: Capsalidae ) from cultured marine fishes of Japan. J. Parasitol. 1995 , 81 , 223–227. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Norbury, L.J.; Shirakashi, S.; Power, C.; Nowak, B.F.; Bott, N.J. Praziquantel use in aquaculture–Current status and emerging issues. Int. J. Parasitol. Drug Res. 2022 , 18 , 87–102. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Jung, S.-J.; Kitamura, S.-I.; Aoyana, M.; Song, J.-Y.; Kim, B.-K.; Oh, M.-J. Immune response of olive flounder, Paralichthys olivaceus against Miamiensis avidus ( Ciliophora: Scuticociliatida ). J. Fish Pathol. 2006 , 19 , 173–181. [ Google Scholar ]
  • Song, J.Y.; Sasaki, K.; Okada, T.; Sakashita, M.; Kawakami, H.; Matsuoka, S.; Kang, H.S.; Nakayama, K.; Jung, S.J.; Oh, M.J. Antigenic differences of the scuticociliate Miamiensis avidus from Japan. J. Fish Dis. 2009 , 12 , 1027–1034. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Kole, S.; Dar, S.A.; Shin, M.; Jeong, J.; Jung, J. Potential Efficacy of Chitosan-Poly (Lactide-Co-Glycolide)-Encapsulated Trivalent Immersion Vaccine in Olive Flounder ( Paralichthys olivaceus ) Against Viral Hemorrhagic Septicemia Virus, Streptococcus parauberis Serotype I, and Miamiensis avidus (Scuticociliate). Front. Immunol. 2021 , 12 , 761130. [ Google Scholar ]
  • Motokawa, S.; Narasaki, Y.; Song, J.Y.; Yokoyama, Y.; Hirose, E.; Murakami, S.; Jung, S.-J.; Oh, M.J.; Nakayama, K.; Kitamura, S.I. Analysis of genes encoding high antigenicity polypeptides in three serotypes of Miamiensis avidus . Parasitol. Int. 2018 , 67 , 196–202. [ Google Scholar ] [ CrossRef ]
  • Nakamura, Y.; Takano, T.; Yasuike, M.; Sakai, T.; Matsuyama, T.; Sano, M. Comparative genomics reveals that a fish pathogenic bacterium Edwardsiella tarda has acquired the locus of enterocyte effacement (LEE) through horizontal gene transfer. BMC Genom. 2013 , 14 , 642. [ Google Scholar ] [ CrossRef ]
  • Kusuda, R.; Inoue, M.; Sugiura, H.; Kawai, K. Characteristics of a pathogenic Mycobacterium sp. isolated from cultured striped jack, Pseudocaranx dentex . Aquac. Sci. 1993 , 41 , 125–131. [ Google Scholar ]
  • Kusuda, R.; Kawakami, K.; Kawai, K. A fish-pathogenic Mycobacterium sp. isolated from an epizootic of cultured yellowtail. Nippon. Suisan Gakkaishi 1987 , 53 , 1797–1804. [ Google Scholar ] [ CrossRef ]
  • Maekawa, S.; Yoshida, T.; Wang, P.; Chen, S. Current knowledge of nocardiosis in teleost fish. J. Fish Dis. 2018 , 41 , 413–419. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Mochizuki, M.; Kim, H.J.; Kasai, H.; Nishizawa, T.; Yoshimizu, M. Virulence Change of Infectious Hematopoietic Necrosis Virus against Rainbow trout Oncorhynchus mykiss with Viral Molecular Evolution. Fish Pathol. 2009 , 44 , 159–165. [ Google Scholar ] [ CrossRef ]
  • Watt, J.; Liu, J. Preclinical Progress of Subunit and Live Attenuated Mycobacterium tuberculosis Vaccines: A Review following the First in Human Efficacy Trial. Pharmaceutics 2020 , 12 , 848. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Redding, L.; Werner, D.B. DNA vaccines in veterinary use. Expert Rev. Vaccines 2009 , 8 , 1251. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Håstein, T.; Gudding, R.; Evensen, Ø. Bacterial vaccines for fish–an update of the current situation worldwide. Dev. Biol. 2005 , 121 , 55–74. [ Google Scholar ]
  • Torres-Corral, Y.; Girons, A.; González-Barreiro, O.; Seoane, R.; Riaza, A.; Santos, Y. Effect of Bivalent Vaccines against Vibrio anguillarum and Aeromonas salmonicida Subspecie Achromogenes on Health and Survival of Turbot. Vaccines 2021 , 9 , 906. [ Google Scholar ] [ CrossRef ]
  • Silvaraj, S.; Md Yasin, I.S.; A. Karim, M.M.; Saad, M.Z. Elucidating the Efficacy of Vaccination against Vibriosis in Lates calcarifer Using Two Recombinant Protein Vaccines Containing the Outer Membrane Protein K (r-OmpK) of Vibrio alginolyticus and the DNA Chaperone J (r-DnaJ) of Vibrio harveyi . Vaccines 2020 , 8 , 660. [ Google Scholar ]
  • Soler, E.; Houdebine, M. Preparation of recombinant vaccines. Biotechnol. Ann. Rev. 2007 , 13 , 65–94. [ Google Scholar ]
  • Lee, H.; Lee, A.; Park, Y.; Song, S.; Choi, S.; Lee, B. A review of vaccine development and research for industry animals in Korea. Clin. Exp. Vaccine Res. 2012 , 1 , 18–34. [ Google Scholar ] [ CrossRef ]
  • Chambers, M.A.; Graham, S.P.; La Ragione, R.M. Challenges in Veterinary Vaccine Development and Immunization. Vaccines Vet. Dis. 2016 , 2 , 3–35. [ Google Scholar ]
  • Ogawa, K.; Yokoyama, H. Parasitic diseases of cultured marine fish in Japan. Fish Pathol. 1998 , 33 , 303–309. [ Google Scholar ] [ CrossRef ]
  • Piacentini, S.C.; Rohovec, J.S.; Fryer, J.L. Epizootiology of erythrocytic inclusion body syndrome. J. Aquat. Anim. Health 1989 , 1 , 173–179. [ Google Scholar ] [ CrossRef ]
  • Starliper, C.E. Bacterial coldwater disease of fishes caused by Flavobacterium psychrophilum . J. Adv. Res. 2011 , 2 , 97–108. [ Google Scholar ] [ CrossRef ]
  • Castells-Graells, R.; Lomonossoff, G.P. Plant-based Production Can Result in Covalent Cross-linking of Proteins. Plant Biotechnol. J. 2021 , 19 , 1095–1097. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Barta, A.; Sommergruber, K.; Thompson, D.; Hartmuth, K.; Matzke, M.A.; Matzke, A.J.M. The Expression of a Nopaline Synthase? Human Growth Hormone Chimaeric Gene in Transformed Tobacco and Sunflower Callus Tissue. Plant Mol. Biol. 1986 , 6 , 347–357. [ Google Scholar ] [ CrossRef ]
  • Hiatt, A.; Caffferkey, R.; Bowdish, K. Production of Antibodies in Transgenic Plants. Nature 1989 , 342 , 76–78. [ Google Scholar ] [ CrossRef ]
  • Malik, M.S.; Elahi, I.; Sameeullah, M.; Ijaz, F.; Batool, N.; Khalid, F.; Gurel, E.; Saba, K.; Waheed, M.T. In silico designing and characterization of outer membrane protein K (OmpK) from Vibrio anguillarum and its expression in Nicotiana tabacum for the development of a plant-based vaccine against fish vibriosis. J Biotechnol. 2024 , 380 , 51–63. [ Google Scholar ] [ CrossRef ]
  • Shaaltiel, Y.; Gingis-Velitski, S.; Tzaban, S.; Fiks, N.; Tekoah, Y.; Aviezer, D. Plant-Based Oral Delivery of β-Glucocerebrosidase as an Enzyme Replacement Therapy for Gaucher’s Disease. Plant Biotechnol. J. 2015 , 13 , 1033–1040. [ Google Scholar ] [ CrossRef ]
  • Guan, Z.; Guo, B.; Huo, Y.; Guan, Z.; Dai, J.; Wei, Y. Recent Advances and Safety Issues of Transgenic Plant-Derived Vaccines. Appl. Microbiol. Biotechnol. 2013 , 97 , 2817–2840. [ Google Scholar ] [ CrossRef ]
  • Su, H.; van Eerde, A.; Steen, H.S.; Heldal, I.; Haugslien, S.; Ørpetveit, I.; Wüstner, S.C.; Inami, M.; Løvoll, M.; Rimstad, E.; et al. Establishment of a Piscine Myocarditis Virus (PMCV) Challenge Model and Testing of a Plant-Produced Subunit Vaccine Candidate against Cardiomyopathy Syndrome (CMS) in Atlantic Salmon Salmo Salar. Aquaculture 2021 , 541 , 736806. [ Google Scholar ] [ CrossRef ]
  • Buyel, J.F. Plant Molecular Farming–Integration and Exploitation of Side Streams to Achieve Sustainable Biomanufacturing. Front. Plant Sci. 2019 , 9 , 1893. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Shin, Y.J.; Kwon, T.H.; Seo, J.Y.; Kim, T.J. Oral Immunization of Fish against Iridovirus Infection Using Recombinant Antigen Produced from Rice Callus. Vaccine 2013 , 31 , 5210–5215. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Michelet, L.; Lefebvre-Legendre, L.; Burr, S.E.; Rochaix, J.-D.; Goldschmidt-Clermont, M. Enhanced Chloroplast Transgene Expression in a Nuclear Mutant of Chlamydomonas: Enhanced Chloroplast Transgene Expression. Plant Biotechnol. J. 2011 , 9 , 565–574. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Xue, R.; Liu, L.; Cao, G.; Xu, S.; Li, J.; Zou, Y.; Chen, H.; Gong, C. Oral Vaccination of BacFish-Vp6 against Grass Carp Reovirus Evoking Antibody Response in Grass Carp. Fish Shellfish Immunol. 2013 , 34 , 348–355. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Marsian, J.; Hurdiss, D.L.; Ranson, N.A.; Ritala, A.; Paley, R.; Cano, I.; Lomonossoff, G.P. Plant-Made Nervous Necrosis Virus-Like Particles Protect Fish Against Disease. Front. Plant Sci. 2019 , 10 , 880. [ Google Scholar ] [ CrossRef ]
  • Clarke, J.L.; Paruch, L.; Dobrica, M.-O.; Caras, I.; Tucureanu, C.; Onu, A.; Ciulean, S.; Stavaru, C.; Eerde, A.; Wang, Y.; et al. Lettuce-Produced Hepatitis C Virus E1E2 Heterodimer Triggers Immune Responses in Mice and Antibody Production after Oral Vaccination. Plant Biotechnol. J. 2017 , 15 , 1611–1621. [ Google Scholar ] [ CrossRef ]
  • Grisez, L.; Tan, Z. Vaccine development for Asian Aquaculture. Diseases in Asian Aquaculture V Fish health section. In Proceedings of the Fifth Symposium in Asian Aquaculture ; Walker, P., Lester, R., Bondad-Reantaso, M.G., Eds.; Asian Fisheries Society: Goldcoast, Australia, 2005; pp. 483–494. [ Google Scholar ]
  • Brooker, A.J.; Papadopoulou, A.; Gutierrez, C.; Rey, S.; Davie, A.; Migaud, H. Sustainable production and use of cleaner fish for the biological control of sea lice: Recent advances and current challenges. Vet. Rec. 2018 , 183 , 383. [ Google Scholar ] [ CrossRef ]
  • Kole, S.; Shin, S.M.; Kwak, I.S.; Cho, S.H.; Jung, S.J. Efficacy of Chitosan-PLGA encapsulated trivalent oral vaccine against viral haemorrhagic septicemia virus, Streptococcus parauberis , and Miamiensis avidus in olive flounder ( Paralichthys olivaceus ). Fish Shellfish Immunol. 2022 , 127 , 843–854. [ Google Scholar ] [ CrossRef ]
  • Kwon, K.C.; Lamb, A.; Fox, D.; Jegathese, P.S.J. An evaluation of microalgae as a recombinant protein oral delivery platform for fish using green fluorescent protein (GFP). Fish Shellfish Immunol. 2019 , 87 , 414–420. [ Google Scholar ] [ CrossRef ]
  • Loera-Muro, A.; Guerrero-Barrera, A.; Tremblay, D.N.Y.; Hathroubi, S.; Angulo, C. Bacterial biofilm-derived antigens: A new strategy for vaccine development against infectious diseases. Expert Rev. Vaccines 2021 , 20 , 385–396. [ Google Scholar ] [ CrossRef ]
  • Montaner-Tarbes, S.; Fraile, L.; Montoya, M.; Del Portillo, H. Exosome-Based Vaccines: Pros and Cons in the World of Animal Health. Viruses 2021 , 13 , 1499. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Hajissa, K.; Zakaria, R.; Suppian, R.; Mohamed, Z. Epitope-based vaccine as a universal vaccination strategy against Toxoplasma gondii infection: A mini-review. J. Adv. Vet. Anim. Res. 2019 , 6 , 174. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Xu, K.; Wang, Y.; Yang, W.; Cai, W.; Zhang, Y.; Huang, L. Strategies for prevention and control of vibriosis in Asian fish culture. Vaccines 2023 , 11 , 98. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Garcia, S.M.; Rosenberg, A.A. Food security and marine capture fisheries: Characteristics, trends, drivers and future perspectives. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2010 , 365 , 2869–2880. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Karp, M.A.; Peterson, J.O.; Lynch, P.D.; Griffis, R.B.; Adams, C.F.; Arnold, W.S.; Barnett, L.A.K.; deReynier, Y.; DiCosimo, J.; Fenske, K.H.; et al. Accounting for Shifting Distributions and Changing Productivity in the Development of Scientific Advice for Fishery Management. ICES J. Mar. Sci. 2019 , 76 , 1305–1315. [ Google Scholar ] [ CrossRef ]
  • Andrew, N.L.; Evans, L. Approaches and frameworks for management and research in small-scale fisheries. In Smallscale Fisheries Management: Frameworks and Approaches for the Developing World ; CAB International: Oxfordshire, UK, 2011; pp. 16–34. [ Google Scholar ]
  • Natnan, M.E.; Mayalvanan, Y.; Jazamuddin, F.M.; Aizat, W.M.; Low, C.F.; Goh, H.H.; Azizan, K.A.; Bunawan, H.; Baharum, S.N. Omics strategies in current advancements of infectious fish disease management. Biology 2021 , 10 , 1086. [ Google Scholar ] [ CrossRef ]
  • Shivam, S.; El-Matbouli, M.; Kumar, G. Development of Fish Parasite Vaccines in the OMICs Era: Progress and Opportunities. Vaccines 2021 , 9 , 179. [ Google Scholar ] [ CrossRef ]
  • Vinay, T.N.; Bhat, S.; Gon Choudhury, T.; Paria, A.; Jung, M.-H.; Shivani Kallappa, G.; Jung, S.-J. Recent advances in application of nanoparticles in fish vaccine delivery. Rev. Fish. Sci. Aquac. 2018 , 26 , 29–41. [ Google Scholar ] [ CrossRef ]
  • Giri, S.S.; Kim, S.G.; Kang, J.W.; Kwon, J.; Bin Lee, S.; Jung, W.J.; Park, S.C. Applications of carbon nanotubes and polymeric micro-/nanoparticles in fish vaccine delivery: Progress and future perspectives. Rev. Aquac. 2021 , 13 , 1844–1863. [ Google Scholar ] [ CrossRef ]
  • Clarke, J.L.; Waheed, M.T.; Lössl, A.G.; Martinussen, I.; Daniell, H. How can plant genetic engineering contribute to cost-effective fish vaccine development for promoting sustainable aquaculture? Plant Mol. Biol. 2013 , 83 , 33–40. [ Google Scholar ] [ CrossRef ]
  • Assefa, A.; Abunna, F. Maintenance of Fish Health in Aquaculture: Review of Epidemiological Approaches for Prevention and Control of Infectious Disease of Fish. Vet. Med. Int. 2018 , 2018 , 5432497. [ Google Scholar ] [ CrossRef ] [ PubMed ]
  • Snow, M. The contribution of molecular epidemiology to the understanding and control of viral diseases of salmonid aquaculture. Vet. Res. 2011 , 42 , 56. [ Google Scholar ] [ CrossRef ] [ PubMed ]

Click here to enlarge figure

S. No.Infectious Agent/Etiological AgentDiseasesAnimals InfectedVaccines Used to Prevent the Disease (Either Used in Humans or Animals)
1.Avian Influenzae virusAvian InfluenzaPoultry: chickens, ducks, turkeys, geeseAfluria Quadrivalent, Fluarix Quadrivalent, FluLaval Quadrivalent, and Fluzone Quadrivalent
2.Herpes virus, Gallid alphaherpesvirus 2Marek’s disease
(fowl paralysis)
Poultry: chickensHSV vaccine candidate (mRNA-1608), herpes zoster
3.Salmonella sp.SalmenollosisAquatic animals: fishes; tortoises, birds, cattle, pigs, horsesTy21a, Vivotif (Typhoid Vaccine Live Oral Ty21a), Typbar TCV , Typhim Vi, Vivotif
4. Rabies lyssavirusRabiesDogsHDCV or PCEC, human rabies immune globulin (HRIG)
5.BacillusanthracisAnthraxCattle, sheep, goats, camelsAnthrax Vaccine Adsorbed (AVA) or BioThraxTM
6.Brucella bacteriaBrucellosisCattle, sheep, goats, swine, equinesLive-attenuated Brucella abortus strain 19 (S19 vaccine), Brucella abortus S19
7. ListeriamonocytogenesListeriosisBirds, crustaceansUnder clinical trials
8.SARS-CoVSevere acute respiratory syndrome Bats, birds, cattleCOMIRNATY , COMIRNATY Original/Omicron BA.1, COMIRNATY Original/Omicron BA.4-5, VAXZEVRIA, COVISHIELD™, COVID-19 Vaccine, SPIKEVAX, Inactivated COVID-19 Vaccine (Vero Cell), CoronaVac, COVAXIN , COVOVAX™, NUVAXOVID™, CONVIDECIA
9.Nipah virus (NiV)NipahBats, pigs, horses, goats, sheepNipah Virus Vaccine (PHV02)
10.Monkey pox virusMonkey poxRope squirrels, dormice, non-human primates, etc. ACAM2000 , JYNNEOS™ (Imvamune or Imvanex or MVA-BN)
11.ClostridiumbotulinumBotulismFishes, mainly troutFabrizio Anniballi,
Alfonsina Fiore,
Charlotta Löfström,
Viveca Båverud.
12.Mycobacterium sp.Mycobacterial infections All fish Bacille Calmette-Guérin (BCG)
13.E. coliAvian bacterial infections (AVECs)All avian sp.Poulvac E. coli
S. No. DiseasePathogenSymptomsTreatmentReferences
1.ColumnarisDiseaseFlavobacterium columnareLesions in skin, fin erosion, necrosis in gillsAmphenicol, Nifurpirinol,
Nifurprazine, Oxolinic acid
[ , , , , , , ]
2. Epizootic ulcerative syndrome (EUS), or “red spot disease”AphanomycesinvadensRed lesions (sores) or deep ulcersNo effective treatment but can be treated with different parts of Azadirachta indica[ ]
3.Spring viremia of carpRhabdovirus, spring viremia of carp virusDestruction of kidney, spleen and liver tissuesDNA
vaccination may be protectable in fish
[ , , ]
4.LymphocystisLymphocysti virus or Lymphocystis disease virusPebble- or wart-like nodules mostly on the fins, skin, gills, etc.No effective treatment [ , ]
5.Carp poxCyprinid herpesvirus-1 (CyHV-1)Milky skin lesions, thickening of finsNo effective treatment [ , , , , , , , , , , , , ]
SpeciesDiseaseOrganismName of the VaccineMode of AdministrationType of VaccineReference
SalmonInfectious hematopoietic necrosisInfectious hematopoietic necrosis virusAPEX-IHN IMIHNV plasmid vaccine[ ]
Enteric red mouth disease, yersiniosisYersinia ruckeri serotype O1bAlpha ERM SalarIPInactivated bacterial vaccine[ ]
Aquavac YER knowsIPInactivated bacterial vaccine[ ]
Pancreatic diseaseSalmon pancreas disease virusALPHA JECT micro 1 PDIPInactivated viral vaccine[ ]
Salmonid alphavirusClynavIM.DNA plasmid[ ]
Salmon alphaviruses (SAV)PD Norvax Compact PDIPInactivated viral vaccine[ ]
Infectious salmon anemiaInfectious salmon anemia virus (ISAV)ALPHA JECT micro 1 ISAIPInactivated viral vaccine[ ]
TilapiaStreptococcosisS. agalactiae serotype lbAQUAVAC Strep SaIPInactivated viral vaccine[ ]
S. agalactiae serotype Ia and serotype IIIAQUAVAC Strep Sa1IPInactivated viral vaccine[ ]
Tilapia, seabassS. iniaeAQUAVAC Strep SiDip immersion/IPInactivated viral vaccine[ ]
Streptococcus agalactiae IbALPHA JECT micro 1 TilaIPInactivated viral vaccine[ ]
KoiKoi herpes virus diseaseKoi herpes virus (KHV)KV-3Immersion/InjectionAttenuated viral vaccine (not used because of its safety issues)[ ]
Sea bassViral nervous necrosisNodavirusALPHA JECT micro 1 NodaIPInactivated viral vaccine[ ]
Aeromonas veronii infectionAeromonas veroniiAutogenous Aeromonas veronii vaccineIPInactivated bacterial culture[ ]
VibriosisListonella anguillarumALPHA DIP VibDip vaccineInactivated bacterial vaccine[ ]
Asian seabassEpizootic hematopoietic necrosisIridovirusAQUAVAC IridoVIPInactivated viral vaccine[ ]
Seabass, rainbow troutInfectious pancreatic necrosisInfectious pancreatic necrosis virus (IPNV)AquaVac IPN OralOralInactivated viral vaccine[ ]
Alpha Jects 1000IPInactivated viral vaccine[ ]
PangasiusEnteric septicemia disease,
motile aeromonad septicemia
Aeromonas hydrophila and Edwardsiella icataluriALPHA JECT Panga 2IPInactivated bacterial vaccine[ ]
Gray mullet (Mugil cephalus), Nile tilapiaLactococcosisLactococcus garvieaeIchtiovac-LgIPInactivated vaccine
Types of VaccineName of VaccineFishInfectionRemark
Inactivated or heat-killed whole-cell vaccineApha Ject 1000, NorwaySalmonInfectious pancreatic necrosis virusMonovalent
Inactivated SVCVCarpSpring viremia of carp virusSVCV emulsified in oil
Formalin-inactivated IHNVRainbow troutInfectious hematopoietic necrosis virus
Killed VHSVRainbow troutViral hemorrhagic septicemia virus--
Attenuated vaccinesAttenuated KHV IsraelCarpKoi herpes virus
Attenuated
Flavobacterium columnare
All freshwater finfishFlavobacterium columnare--
Septicemia due to enterococciCatfishEdwardsiella ictaluri--
Kidney infection in fish due to bacteriaPacific salmon and Atlantic salmonRenibacterium salmoninarum--
Recombinant vaccinesRecombinant G proteinCarpSVCV--
CIBA-Nodavac-RAll types of fishes infected with nervous necrosis virus (NNV)Red-spotted grouper NNVFirst vaccine indigenously developed in India
Synthetic peptide vaccinesSubunit vaccine IPNV aquabirnavirusRainbow trout and Atlantic salmonInfectious pancreatic necrosis virusesTarget: VP2, VP3 and Capsid proteins
DNA vaccinesApex IHN, CanadaSalmonViruses having G antigen
DNASalmonidsInfectious hematopoietic necrosis rhabdovirusTarget: G glycoprotein
Mucosal vaccinesMicroMatrix™ delivery system (Piscirickettsia salmonis, ISAV and IPNV, Centrovet)Atlantic salmonY. ruckeri V. anguillarum, P. salmonis and IPNV or other similar mucosal infection.Pathogen killed by heat or inactivated by formalin
Plant-based edible vaccinesUnder development in plant Nicotiana benthamianaSalmonidsPMCV and cardiomyopathy syndrome--
Nanoparticle-based vaccinesChitosan-NPs based vaccine formulation NPrgpG, pICrgpG, CSrgpG, NpiVZebrafishViral hemorrhagic septicemia virus.Under experimental trials
OCMCS-hyaluronic acid, OCMCS/aerA-NPs, OCMCS-HA/aerA-NPsEuropean carpAeromonas hydrophilaUnder experimental trials
Monovalent and polyvalent vaccinesME-VAC Aqua StreptNile tilapia fish, Nile tilapiaStreptococcus infectionsEffective against bacterial strains, Streptococcoci, Enterococcoi, and Lactococci
Sr. No.Causative AgentDiseasesType of Fish InfectedLoss in Production/Economic Loss (%)References
1.Aeromonas bacteriaAeromonas infectionsCarps, freshwater fish80–100% [ ]
2.Pseudomonas sp.Strawberry diseaseCarps, rainbow trout, tench 50%[ ]
3.ShewanellaputrefaciensShewanellosisCarps, rainbow trout, zebra fish-[ , ]
4. Mycobacterium sp.MycobacteriosisAll freshwater and marine fish 50%[ ]
5.FlavobacteriumflavobacterBacterial gill diseasesAll fish 60–70%[ ]
6. BirnavirusNecrosisFreshwater fish like salmonids50%[ ]
7.RetrovirusAnemiaWalley pike50%[ ]
8.RanavirusAnemiaCarp50%[ ]
9.MegalocytivirusAnemiaCarp and other freshwater fish60–70%[ ]
S. No.SpeciesVaccination againstReference
1Cold-water vibriosis, Classical vibriosis, Listonella anguillarum, Vibrio ordalii[ ]
2FurunculosisAeromonas salmonicida subspecies achromogenes[ ]
3VibriosisVibrio salmonicida
Vibrio anguillarum
[ ]
4Yersiniosis Yersinia ruckeri[ ]
5PasteurellosisPhotobacterium damselae subspecie piscicida[ ]
6EdwardsiellosisEdwardsiella ictaluri[ ]
7Winter ulcer Moritella viscosa[ ]
8Streptococcosis/LactococcosisStreptococcus iniae, Lactococcus garviae[ ]
S. NoProtein ExpressedExpression SystemTreated AnimalsReference
1.Recombinant major capsid protein (rMCP) of iridovirusRice callusNeoscorpis lithophilus[ ]
2.Nervous necrosis virus (NNV) coat proteinTobacco chloroplast Grouper fish[ ]
3.AcrV and VapA antigens from Aeromonas salmonicidaChloroplasts of Chlamydomonas reinhardtiiSalmon[ ]
4.VP28 from white spot syndrome virusChlamydomonas reinhardtiiPenaeus monodon[ ]
5.VP28 from white spot syndrome virusDunaliella salinaCrayfish[ ]
6.Virus-like-particle from Atlantic cod nervous necrosis virus (ACNNV)Nicotiana benthamianaSalmonids[ ]
7. ORF1 from cardiomyopathy syndrome (PMCV)Nicotiana benthamianaSalmonids[ ]
World Position NumberCountryTotal Consumption (Million Tons)
1China99,875
2India24,601
3United States10,423
4Mexico6061
5Brazil5460
6Nigeria5359
7France3494
8Spain2529
9Peru23,331
10Ghana9121
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Kumar, A.; Middha, S.K.; Menon, S.V.; Paital, B.; Gokarn, S.; Nelli, M.; Rajanikanth, R.B.; Chandra, H.M.; Mugunthan, S.P.; Kantwa, S.M.; et al. Current Challenges of Vaccination in Fish Health Management. Animals 2024 , 14 , 2692. https://doi.org/10.3390/ani14182692

Kumar A, Middha SK, Menon SV, Paital B, Gokarn S, Nelli M, Rajanikanth RB, Chandra HM, Mugunthan SP, Kantwa SM, et al. Current Challenges of Vaccination in Fish Health Management. Animals . 2024; 14(18):2692. https://doi.org/10.3390/ani14182692

Kumar, Avnish, Sushil Kumar Middha, Soumya Vettiyatil Menon, Biswaranjan Paital, Shyam Gokarn, Meghana Nelli, Rakshith Bangalore Rajanikanth, Harish Mani Chandra, Susithra Priyadarshni Mugunthan, Sanwar Mal Kantwa, and et al. 2024. "Current Challenges of Vaccination in Fish Health Management" Animals 14, no. 18: 2692. https://doi.org/10.3390/ani14182692

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  • Review Article
  • Published: 22 December 2020

A guide to vaccinology: from basic principles to new developments

  • Andrew J. Pollard   ORCID: orcid.org/0000-0001-7361-719X 1 , 2 &
  • Else M. Bijker 1 , 2  

Nature Reviews Immunology volume  21 ,  pages 83–100 ( 2021 ) Cite this article

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  • Infectious diseases

A Publisher Correction to this article was published on 05 January 2021

This article has been updated

Immunization is a cornerstone of public health policy and is demonstrably highly cost-effective when used to protect child health. Although it could be argued that immunology has not thus far contributed much to vaccine development, in that most of the vaccines we use today were developed and tested empirically, it is clear that there are major challenges ahead to develop new vaccines for difficult-to-target pathogens, for which we urgently need a better understanding of protective immunity. Moreover, recognition of the huge potential and challenges for vaccines to control disease outbreaks and protect the older population, together with the availability of an array of new technologies, make it the perfect time for immunologists to be involved in designing the next generation of powerful immunogens. This Review provides an introductory overview of vaccines, immunization and related issues and thereby aims to inform a broad scientific audience about the underlying immunological concepts.

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Introduction.

Vaccines have transformed public health, particularly since national programmes for immunization first became properly established and coordinated in the 1960s. In countries with high vaccine programme coverage, many of the diseases that were previously responsible for the majority of childhood deaths have essentially disappeared 1 (Fig.  1 ). The World Health Organization (WHO) estimates that 2–3 million lives are saved each year by current immunization programmes, contributing to the marked reduction in mortality of children less than 5 years of age globally from 93 deaths per 1,000 live births in 1990 to 39 deaths per 1,000 live births in 2018 (ref. 2 ).

figure 1

The introduction of vaccination against infectious diseases such as diphtheria (part a ), capsular group C meningococcus (part b ), polio (part c ), Haemophilus influenzae type B (part d ), measles (part e ) and pertussis (part f ) led to a marked decrease in their incidence. Of note, the increase in reports of H. influenzae type B in 2001 led to a catch-up vaccination campaign, after which the incidence reduced. For pertussis, a decline in vaccine coverage led to an increase in cases in the late 1970s and 1980s, but disease incidence reduced again after vaccine coverage increased. Adapted with permission from the Green Book, information for public health professionals on immunisation, Public Health England , contains public sector information licensed under the Open Government Licence v3.0.

Vaccines exploit the extraordinary ability of the highly evolved human immune system to respond to, and remember, encounters with pathogen antigens . However, for much of history, vaccines have been developed through empirical research without the involvement of immunologists. There is a great need today for improved understanding of the immunological basis for vaccination to develop vaccines for hard-to-target pathogens (such as Mycobacterium tuberculosis , the bacterium that causes tuberculosis (TB)) 3 and antigenically variable pathogens (such as HIV) 4 , to control outbreaks that threaten global health security (such as COVID-19 or Ebola) 5 , 6 and to work out how to revive immune responses in the ageing immune system 7 to protect the growing population of older adults from infectious diseases.

In this Review, which is primarily aimed at a broad scientific audience, we provide a guide to the history (Box  1 ), development, immunological basis and remarkable impact of vaccines and immunization programmes on infectious diseases to provide insight into the key issues facing immunologists today. We also provide some perspectives on current and future challenges in continuing to protect the world’s population from common pathogens and emerging infectious threats. Communicating effectively about the science of vaccination to a sceptical public is a challenge for all those engaged in vaccine immunobiology but is urgently needed to realign the dialogue and ensure public health 8 . This can only be achieved by being transparent about what we know and do not know, and by considering the strategies to overcome our existing knowledge gaps.

Box 1 A brief history of vaccination

Epidemics of smallpox swept across Europe in the seventeenth and eighteenth centuries, accounting for as much as 29% of the death rate of children in London 137 . Initial efforts to control the disease led to the practice of variolation, which was introduced to England by Lady Mary Wortley Montagu in 1722, having been used in the Far East since the mid-1500s (see Nature Milestones in Vaccines ). In variolation, material from the scabs of smallpox lesions was scratched into the skin in an attempt to provide protection against the disease. Variolation did seem to induce protection, reducing the attack rate during epidemics, but sadly some of those who were variolated developed the disease and sometimes even died. It was in this context that Edward Jenner wrote ‘An Inquiry into the Causes and Effects of the Variole Vaccinae…’ in 1798. His demonstration, undertaken by scratching material from cowpox lesions taken from the hands of a milkmaid, Sarah Nelms, into the skin of an 8-year-old boy, James Phipps, who he subsequently challenged with smallpox, provided early evidence that vaccination could work. Jenner’s contribution to medicine was thus not the technique of inoculation but his startling observation that milkmaids who had had mild cowpox infections did not contract smallpox, and the serendipitous assumption that material from cowpox lesions might immunize against smallpox. Furthermore, Jenner brilliantly predicted that vaccination could lead to the eradication of smallpox; in 1980, the World Health Assembly declared the world free of naturally occurring smallpox.

Almost 100 years after Jenner, the work of Louis Pasteur on rabies vaccine in the 1880s heralded the beginning of a frenetic period of development of new vaccines, so that by the middle of the twentieth century, vaccines for many different diseases (such as diphtheria, pertussis and typhoid) had been developed as inactivated pathogen products or toxoid vaccines. However, it was the coordination of immunization as a major public health tool from the 1950s onwards that led to the introduction of comprehensive vaccine programmes and their remarkable impact on child health that we enjoy today. In 1974, the World Health Organization launched the Expanded Programme on Immunization and a goal was set in 1977 to reach every child in the world with vaccines for diphtheria, pertussis, tetanus, poliomyelitis, measles and tuberculosis by 1990. Unfortunately, that goal has still not been reached; although global coverage of 3 doses of the diphtheria–tetanus–pertussis vaccine has risen to more than 85%, there are still more than 19 million children who did not receive basic vaccinations in 2019 (ref. 105 ).

What is in a vaccine?

A vaccine is a biological product that can be used to safely induce an immune response that confers protection against infection and/or disease on subsequent exposure to a pathogen. To achieve this, the vaccine must contain antigens that are either derived from the pathogen or produced synthetically to represent components of the pathogen. The essential component of most vaccines is one or more protein antigens that induce immune responses that provide protection. However, polysaccharide antigens can also induce protective immune responses and are the basis of vaccines that have been developed to prevent several bacterial infections, such as pneumonia and meningitis caused by Streptococcus pneumoniae , since the late 1980s 9 . Protection conferred by a vaccine is measured in clinical trials that relate immune responses to the vaccine antigen to clinical end points (such as prevention of infection, a reduction in disease severity or a decreased rate of hospitalization). Finding an immune response that correlates with protection can accelerate the development of and access to new vaccines 10 (Box  2 ).

Vaccines are generally classified as live or non-live (sometimes loosely referred to as ‘inactivated’) to distinguish those vaccines that contain attenuated replicating strains of the relevant pathogenic organism from those that contain only components of a pathogen or killed whole organisms (Fig.  2 ). In addition to the ‘traditional’ live and non-live vaccines, several other platforms have been developed over the past few decades, including viral vectors, nucleic acid-based RNA and DNA vaccines, and virus-like particles (discussed in more detail later).

figure 2

Schematic representation of different types of vaccine against pathogens; the text indicates against which pathogens certain vaccines are licensed and when each type of vaccine was first introduced. BCG, Mycobacterium bovis bacillus Calmette–Guérin.

The distinction between live and non-live vaccines is important. The former may have the potential to replicate in an uncontrolled manner in immunocompromised individuals (for example, children with some primary immunodeficiencies, or individuals with HIV infection or those receiving immunosuppressive drugs), leading to some restrictions to their use 11 . By contrast, non-live vaccines pose no risk to immunocompromised individuals (although they may not confer protection in those with B cell or combined immunodeficiency, as explained in more detail later).

Live vaccines are developed so that, in an immunocompetent host, they replicate sufficiently to produce a strong immune response, but not so much as to cause significant disease manifestations (for example, the vaccines for measles, mumps, rubella and rotavirus, oral polio vaccine, the Mycobacterium bovis bacillus Calmette–Guérin (BCG) vaccine for TB and live attenuated influenza vaccine). There is a trade-off between enough replication of the vaccine pathogen to induce a strong immune response and sufficient attenuation of the pathogen to avoid symptomatic disease. For this reason, some safe, live attenuated vaccines require multiple doses and induce relatively short-lived immunity (for example, the live attenuated typhoid vaccine, Ty21a) 12 , and other live attenuated vaccines may induce some mild disease (for example, about 5% of children will develop a rash and up to 15% fever after measles vaccination) 13 .

The antigenic component of non-live vaccines can be killed whole organisms (for example, whole-cell pertussis vaccine and inactivated polio vaccine), purified proteins from the organism (for example, acellular pertussis vaccine), recombinant proteins (for example, hepatitis B virus (HBV) vaccine) or polysaccharides (for example, the pneumococcal vaccine against S. pneumoniae ) (Fig.  2 ). Toxoid vaccines (for example, for tetanus and diphtheria) are formaldehyde-inactivated protein toxins that have been purified from the pathogen.

Non-live vaccines are often combined with an adjuvant to improve their ability to induce an immune response (immunogenicity). There are only a few adjuvants that are used routinely in licensed vaccines. However, the portfolio of adjuvants is steadily expanding, with liposome-based adjuvants and oil-in-water emulsions being licensed in the past few decades 14 . The mechanism of action of aluminium salts (alum), although extensively used as an adjuvant for more than 80 years, remains incompletely understood 15 , but there is increasing evidence that immune responses and protection can be enhanced by the addition of newer adjuvants that provide danger signals to the innate immune system . Examples of these novel adjuvants are the oil-in-water emulsion MF59, which is used in some influenza vaccines 16 ; AS01 , which is used in one of the shingles vaccines and the licensed malaria vaccine 17 ; and AS04 , which is used in a vaccine against human papillomavirus (HPV) 18 .

Vaccines contain other components that function as preservatives, emulsifiers (such as polysorbate 80) or stabilizers (for example, gelatine or sorbitol). Various products used in the manufacture of vaccines could theoretically also be carried over to the final product and are included as potential trace components of a vaccine, including antibiotics, egg or yeast proteins, latex, formaldehyde and/or gluteraldehyde and acidity regulators (such as potassium or sodium salts). Except in the case of allergy to any of these components, there is no evidence of risk to human health from these trace components of some vaccines 19 , 20 .

Box 2 Correlates of protection

The identification of correlates of protection is helpful in vaccine development as they can be used to compare products and to predict whether the use of an efficacious vaccine in a new population (for example, a different age group, medical background or geographical location) is likely to provide the same protection as that observed in the original setting. There is considerable confusion in the literature about the definition of a correlate of protection. For the purposes of this discussion, it is useful to separate out two distinct meanings. A mechanistic correlate of protection is the specific functional immune mechanism that is believed to confer protection. For example, antitoxin antibodies, which are induced by the tetanus toxoid vaccine, confer protection directly by neutralizing the activity of the toxin. A non-mechanistic correlate of protection does not in itself provide the protective function but has a statistical relationship with the mechanism of protection. An example of a non-mechanistic correlate of protection is total IgG antibody levels against pneumococci. These IgG antibodies contain the mechanistic correlate (thought to be a subset of opsonophagocytic antibodies ) but the mechanism of protection is not being directly measured. Correlates of protection can be measured in clinical trials if there are post-vaccination sera available from individuals who do or do not develop disease, although large-scale serum collection from participants is rarely undertaken in phase III clinical efficacy trials. An alternative approach is to estimate the correlates of protection by extrapolating from sero-epidemiological studies in a vaccinated population and relating the data to disease incidence in the population. Human challenge studies have also been used to determine correlates of protection, although the dose of challenge bacterium or virus and the experimental conditions may not relate closely to natural infection, which can limit the utility of these observations.

Vaccines induce antibodies

The adaptive immune response is mediated by B cells that produce antibodies (humoral immunity) and by T cells (cellular immunity). All vaccines in routine use, except BCG (which is believed to induce T cell responses that prevent severe disease and innate immune responses that may inhibit infection; see later), are thought to mainly confer protection through the induction of antibodies (Fig.  3 ). There is considerable supportive evidence that various types of functional antibody are important in vaccine-induced protection, and this evidence comes from three main sources: immunodeficiency states, studies of passive protection and immunological data.

figure 3

The immune response following immunization with a conventional protein antigen. The vaccine is injected into muscle and the protein antigen is taken up by dendritic cells, which are activated through pattern recognition receptors (PRRs) by danger signals in the adjuvant, and then trafficked to the draining lymph node. Here, the presentation of peptides of the vaccine protein antigen by MHC molecules on the dendritic cell activates T cells through their T cell receptor (TCR). In combination with signalling (by soluble antigen) through the B cell receptor (BCR), the T cells drive B cell development in the lymph node. Here, the T cell-dependent B cell development results in maturation of the antibody response to increase antibody affinity and induce different antibody isotypes. The production of short-lived plasma cells, which actively secrete antibodies specific for the vaccine protein, produces a rapid rise in serum antibody levels over the next 2 weeks. Memory B cells are also produced, which mediate immune memory. Long-lived plasma cells that can continue to produce antibodies for decades travel to reside in bone marrow niches. CD8 + memory T cells can proliferate rapidly when they encounter a pathogen, and CD8 + effector T cells are important for the elimination of infected cells.

Immunodeficiency states

Individuals with some known immunological defects in antibodies or associated immune components are particularly susceptible to infection with certain pathogens, which can provide insight into the characteristics of the antibodies that are required for protection from that particular pathogen. For example, individuals with deficiencies in the complement system are particularly susceptible to meningococcal disease caused by infection with Neisseria meningitidis 21 because control of this infection depends on complement-mediated killing of bacteria, whereby complement is directed to the bacterial surface by IgG antibodies. Pneumococcal disease is particularly common in individuals with reduced splenic function 22 (which may be congenital, resulting from trauma or associated with conditions such as sickle cell disease); S. pneumoniae bacteria that have been opsonized with antibody and complement are normally removed from the blood by phagocytes in the spleen, which are no longer present in individuals with hyposplenism. Antibody-deficient individuals are susceptible to varicella zoster virus (which causes chickenpox) and other viral infections, but, once infected, they can control the disease in the same way as an immunocompetent individual, so long as they have a normal T cell response 23 .

Passive protection

It has been clearly established that intramuscular or intravenous infusion of exogenous antibodies can provide protection against some infections. The most obvious example is that of passive transfer of maternal antibodies across the placenta, which provides newborn infants with protection against a wide variety of pathogens, at least for a few months after birth. Maternal vaccination with pertussis 24 , tetanus 25 and influenza 26 vaccines harnesses this important protective adaptation to reduce the risk of disease soon after birth and clearly demonstrates the role of antibodies in protection against these diseases. Vaccination of pregnant women against group B streptococci 27 and respiratory syncytial virus (RSV) 28 has not yet been shown to be effective at preventing neonatal or infant infection, but it has the potential to reduce the burden of disease in the youngest infants. Other examples include the use of specific neutralizing antibodies purified from immune donors to prevent the transmission of various viruses, including varicella zoster virus, HBV and measles virus 29 . Individuals with inherited antibody deficiency are without defence against serious viral and bacterial infections, but regular administration of serum antibodies from an immunocompetent donor can provide almost entirely normal immune protection for the antibody-deficient individual.

Immunological data

Increasing knowledge of immunology provides insights into the mechanisms of protection mediated by vaccines. For example, polysaccharide vaccines, which are made from the surface polysaccharides of invasive bacteria such as meningococci ( N. meningitidis ) 30 and pneumococci ( S. pneumoniae ) 31 , provide considerable protection against these diseases. It is now known that these vaccines do not induce T cell responses, as polysaccharides are T cell-independent antigens , and thus they must mediate their protection through antibody-dependent mechanisms. Protein–polysaccharide conjugate vaccines contain the same polysaccharides from the bacterial surface, but in this case they are chemically conjugated to a protein carrier (mostly tetanus toxoid, or diphtheria toxoid or a mutant protein derived from it, known as CRM 197 ) 32 , 33 , 34 . The T cells induced by the vaccine recognize the protein carrier (a T cell-dependent antigen ) and these T cells provide help to the B cells that recognize the polysaccharide, but no T cells are induced that recognize the polysaccharide and, thus, only antibody is involved in the excellent protection induced by these vaccines 35 . Furthermore, human challenge studies offer the opportunity to efficiently assess correlates of protection (Box  2 ) under controlled circumstances 36 , and they have been used to demonstrate the role of antibodies in protection against malaria 37 and typhoid 38 .

Vaccines need T cell help

Although most of the evidence points to antibodies being the key mediators of sterilizing immunity induced by vaccination, most vaccines also induce T cell responses. The role of T cells in protection is poorly characterized, except for their role in providing help for B cell development and antibody production in lymph nodes. From studies of individuals with inherited or acquired immunodeficiency, it is clear that whereas antibody deficiency increases susceptibility to acquisition of infection, T cell deficiency results in failure to control a pathogen after infection. For example, T cell deficiency results in uncontrolled and fatal varicella zoster virus infection, whereas individuals with antibody deficiency readily develop infection but recover in the same way as immunocompetent individuals. The relative suppression of T cell responses that occurs at the end of pregnancy increases the severity of infection with influenza and varicella zoster viruses 39 .

Although evidence for the involvement of T cells in vaccine-induced protection is limited, this is likely owing, in part, to difficulties in accessing T cells to study as only the blood is easily accessible, whereas many T cells are resident in tissues such as lymph nodes. Furthermore, we do not yet fully understand which types of T cell should be measured. Traditionally, T cells have been categorized as either cytotoxic (killer) T cells or helper T cells. Subtypes of T helper cells (T H cells) can be distinguished by their profiles of cytokine production. T helper 1 (T H 1) cells and T H 2 cells are mainly important for establishing cellular immunity and humoral immunity, respectively, although T H 1 cells are also associated with generation of the IgG antibody subclasses IgG1 and IgG3. Other T H cell subtypes include T H 17 cells (which are important for immunity at mucosal surfaces such as the gut and lung) and T follicular helper cells (located in secondary lymphoid organs, which are important for the generation of high-affinity antibodies (Fig.  3 )). Studies show that sterilizing immunity against carriage of S. pneumoniae in mice can be achieved by the transfer of T cells from donor mice exposed to S. pneumoniae 40 , which indicates that further investigation of T cell-mediated immunity is warranted to better understand the nature of T cell responses that could be harnessed to improve protective immunity.

Although somewhat simplistic, the evidence therefore indicates that antibodies have the major role in prevention of infection (supported by T H cells), whereas cytotoxic T cells are required to control and clear established infection.

Features of vaccine-induced protection

Vaccines have been developed over the past two centuries to provide direct protection of the immunized individual through the B cell-dependent and T cell-dependent mechanisms described above. As our immunological understanding of vaccines has developed, it has become apparent that this protection is largely manifested through the production of antibody. Another important feature of vaccine-induced protection is the induction of immune memory . Vaccines are usually developed to prevent clinical manifestations of infection. However, some vaccines, in addition to preventing the disease, may also protect against asymptomatic infection or colonization, thereby reducing the acquisition of a pathogen and thus its onward transmission, establishing herd immunity. Indeed, the induction of herd immunity is perhaps the most important characteristic of immunization programmes, with each dose of vaccine protecting many more individuals than the vaccine recipient. Some vaccines may also drive changes in responsiveness to future infections with different pathogens, so called non-specific effects, perhaps by stimulating prolonged changes in the activation state of the innate immune system.

Immune memory

In encountering a pathogen, the immune system of an individual who has been vaccinated against that specific pathogen is able to more rapidly and more robustly mount a protective immune response. Immune memory has been shown to be sufficient for protection against pathogens when the incubation period is long enough for a new immune response to develop (Fig.  4a ). For example, in the case of HBV, which has an incubation period of 6 weeks to 6 months, a vaccinated individual is usually protected following vaccination even if exposure to the virus occurs some time after vaccination and the levels of vaccine-induced antibody have already waned 41 . Conversely, it is thought that immune memory may not be sufficient for protection against rapidly invasive bacterial infections that can cause severe disease within hours or days following acquisition of the pathogen 42 (Fig.  4b ). For example, there is evidence in the case of both Haemophilus influenzae type B (Hib) and capsular group C meningococcal infection that individuals with vaccine-induced immune memory can still develop disease once their antibody levels have waned, despite mounting robust, although not rapid enough, memory responses 43 , 44 . The waning of antibody levels varies depending on the age of the vaccine recipient (being very rapid in infants as a result of the lack of bone marrow niches for B cell survival), the nature of the antigen and the number of booster doses administered. For example, the virus-like particles used in the HPV vaccine induce antibody responses that can persist for decades, whereas relatively short-term antibody responses are induced by pertussis vaccines; and the inactivated measles vaccine induces shorter-lived antibody responses than the live attenuated measles vaccine.

figure 4

Antibody levels in the circulation wane after primary vaccination, often to a level below that required for protection. Whether immune memory can protect against a future pathogen encounter depends on the incubation time of the infection, the quality of the memory response and the level of antibodies induced by memory B cells. a | The memory response may be sufficient to protect against disease if there is a long incubation period between pathogen exposure and the onset of symptoms to allow for the 3–4 days required for memory B cells to generate antibody titres above the protective threshold. b | The memory response may not be sufficient to protect against disease if the pathogen has a short incubation period and there is rapid onset of symptoms before antibody levels have reached the protective threshold. c | In some cases, antibody levels after primary vaccination remain above the protective threshold and can provide lifelong immunity.

So, for infections that are manifest soon after acquisition of the pathogen, the memory response may be insufficient to control these infections and sustained immunity for individual protection through vaccination can be difficult to achieve. One solution to this is the provision of booster doses of vaccine through childhood (as is the case, for example, for diphtheria, tetanus, pertussis and polio vaccines), in an attempt to sustain antibody levels above the protective threshold. It is known that provision of five or six doses of tetanus 45 or diphtheria 46 vaccine in childhood provides lifelong protection, and so booster doses of these vaccines throughout adult life are not routine in most countries that can achieve high coverage with multiple childhood doses. Given that, for some infections, the main burden is in young children, continued boosting after the second year of life is not undertaken (for example, the invasive bacterial infections including Hib and capsular group B meningococci).

The exception is the pertussis vaccine, where the focus of vaccine programmes is the prevention of disease in infancy; this is achieved both by direct vaccination of infants as well as by the vaccination of other age groups, including adolescents and pregnant women in some programmes, to reduce transmission to infants and provide protection by antibody transfer across the placenta. Notably, in high-income settings, many countries (starting in the 1990s) have switched to using the acellular pertussis vaccine, which is less reactogenic than (and therefore was thought to be preferable to) the older whole-cell pertussis vaccine that is still used in most low-income countries. It is now apparent that acellular pertussis vaccine induces a shorter duration of protection against clinical pertussis and may be less effective against bacterial transmission than is the whole-cell pertussis vaccine 47 . Many high-income countries have observed a rise in pertussis cases since the introduction of the acellular vaccine, a phenomenon that is not observed in low-income nations using the whole-cell vaccine 48 .

By contrast, lifelong protection seems to be the rule following a single dose with some of the live attenuated viral vaccines, such as yellow fever vaccine 49 (Fig.  4c ), although it is apparent that protection is incomplete with others. In the case of varicella zoster and measles–mumps vaccines, some breakthrough cases are described during disease outbreaks among those individuals who have previously been vaccinated, although it is unclear whether this represents a group in whom immunity has waned (and who therefore needed booster vaccination) or a group for whom the initial vaccine did not induce a successful immune response. Breakthrough cases are less likely in those individuals who have had two doses of measles–mumps–rubella vaccine 50 or varicella zoster vaccine 51 , and cases that do occur are usually mild, which indicates that there is some lasting immunity to the pathogen.

An illustration of the complexity of immune memory and the importance of understanding its underlying immunological mechanisms in order to improve vaccination strategies is provided by the concept of ‘original antigenic sin’. This phenomenon describes how the immune system fails to generate an immune response against a strain of a pathogen if the host was previously exposed to a closely related strain, and this has been demonstrated in several infections, including dengue 52 and influenza 53 . This might have important implications for vaccine development if only a single pathogen strain or pathogen antigen is included in a vaccine, as vaccine recipients might then have impaired immune responses if later exposed to different strains of the same pathogen, potentially putting them at increased risk of infection or more severe disease. Strategies to overcome this include the use of adjuvants that stimulate innate immune responses, which can induce sufficiently cross-reactive B cells and T cells that recognize different strains of the same pathogen, or the inclusion of as many strains in a vaccine as possible, the latter approach obviously being limited by the potential of new strains to emerge in the future 54 .

Herd immunity

Although direct protection of individuals through vaccination has been the focus of most vaccine development and is crucial to demonstrate for the licensure of new vaccines, it has become apparent that a key additional component of vaccine-induced protection is herd immunity, or more correctly ‘herd protection’ (Fig.  5 ). Vaccines cannot protect every individual in a population directly, as some individuals are not vaccinated for various reasons and others do not mount an immune response despite vaccination. Fortunately, however, if enough individuals in a population are vaccinated, and if vaccination prevents not only the development of disease but also infection itself (discussed in more detail below), transmission of the pathogen can be interrupted and the incidence of disease can fall further than would be expected, as a result of the indirect protection of individuals who would otherwise be susceptible.

figure 5

The concept of herd immunity for a highly contagious disease such as measles. Susceptible individuals include those who have not yet been immunized (for example, being too young), those who cannot be immunized (for example, as a result of immunodeficiency), those for whom the vaccine did not induce immunity, those for whom initial vaccine-induced immunity has waned and those who refused immunization.

For highly transmissible pathogens, such as those causing measles or pertussis, around 95% of the population must be vaccinated to prevent disease outbreaks, but for less transmissible organisms a lower percentage of vaccine coverage may be sufficient to have a substantial impact on disease (for example, for polio, rubella, mumps or diphtheria, vaccine coverage can be ≤86%). For influenza, the threshold for herd immunity is highly variable from season to season and is also confounded by the variability in vaccine effectiveness each year 55 . Modest vaccine coverage, of 30–40%, is likely to have an impact on seasonal influenza epidemics, but ≥80% coverage is likely to be optimal 56 . Interestingly, there might be a downside to very high rates of vaccination, as the absence of pathogen transmission in that case will prevent natural boosting of vaccinated individuals and could lead to waning immunity if booster doses of vaccine are not used.

Apart from tetanus vaccine, all other vaccines in the routine immunization schedule induce some degree of herd immunity (Fig.  5 ), which substantially enhances population protection beyond that which could be achieved by vaccination of the individual only. Tetanus is a toxin-mediated disease acquired through infection of breaks in the skin contaminated with the toxin-producing bacteria Clostridium tetani from the environment — so, vaccination of the community with the tetanus toxoid will not prevent an unvaccinated individual acquiring the infection if they are exposed. As an example of the success of herd immunity, vaccination of children and young adults (up to 19 years of age) with capsular group C meningococcal vaccine in a mass campaign in 1999 resulted in almost complete elimination of disease from the UK in adults as well as children 57 . Currently, the strategy for control of capsular groups A, C, W and Y meningococci in the UK is vaccination of adolescents, as they are mainly responsible for transmission and vaccine-mediated protection of this age group leads to community protection through herd immunity 58 . The HPV vaccine was originally introduced to control HPV-induced cervical cancer, with vaccination programmes directed exclusively at girls, but it was subsequently found to also provide protection against HPV infection in heterosexual boys through herd immunity, which led to a marked reduction in the total HPV burden in the population 59 , 60 .

Prevention of infection versus disease

Whether vaccines prevent infection or, rather, the development of disease after infection with a pathogen is often difficult to establish, but improved understanding of this distinction could have important implications for vaccine design. BCG vaccination can be used as an example to illustrate this point, as there is some evidence for the prevention of both disease and infection. BCG vaccination prevents severe disease manifestations such as tuberculous meningitis and miliary TB in children 61 and animal studies have shown that BCG vaccination reduces the spread of M. tuberculosis bacteria in the blood, mediated by T cell immunity 62 , thereby clearly showing that vaccination has protective effects against the development of disease after infection. However, there is also good evidence that BCG vaccination reduces the risk of infection. In a TB outbreak at a school in the UK, 29% of previously BCG-vaccinated children had a memory T cell response to infection, as indicated by a positive interferon-γ release assay , as compared with 47% of the unvaccinated children 63 . A similar effect was seen when studying Indonesian household members of patients with TB, who had a 45% reduced chance of developing a positive interferon-γ release assay response to M. tuberculosis if they had previously been BCG vaccinated 64 . The lack of a T cell response in previously vaccinated individuals indicates that the BCG vaccine induces an innate immune response that results in ‘early clearance’ of the bacteria and prevents infection that induces an adaptive immune response. It will be hugely valuable for future vaccine development to better understand the induction of such protective innate immune responses so that they might be reproduced for other pathogens.

In the case of the current pandemic of the virus SARS-CoV-2, a vaccine that prevents severe disease and disease-driven hospitalization could have a substantial public health impact. However, a vaccine that could also block acquisition of the virus, and thus prevent both asymptomatic and mild infection, would have much larger impact by reducing transmission in the community and potentially establishing herd immunity.

Non-specific effects

Several lines of evidence indicate that immunization with some vaccines perturbs the immune system in such a way that there are general changes in immune responsiveness that can increase protection against unrelated pathogens 65 . This phenomenon has been best described in humans in relation to BCG and measles vaccines, with several studies showing marked reductions in all-cause mortality when these vaccines are administered to young children that are far beyond the expected impact from the reduction in deaths attributed to TB or measles, respectively 66 . These non-specific effects may be particularly important in high-mortality settings, but not all studies have identified the phenomenon. Although several immunological mechanisms have been proposed, the most plausible of which is that epigenetic changes can occur in innate immune cells as a result of vaccination, there are no definitive studies in humans that link immunological changes after immunization with important clinical end points, and it remains unclear how current immunization schedules might be adapted to improve population protection through non-specific effects. Of great interest in the debate, recent studies have indicated that measles disease casts a prolonged ‘shadow’ over the immune system, with depletion of existing immune memory, such that children who have had the disease have an increased risk of death from other causes over the next few years 67 , 68 . In this situation, measles vaccination reduces mortality from measles as well as the unconnected diseases that would have occurred during the ‘shadow’, resulting in a benefit that seems to be non-specific but actually relates directly to the prevention of measles disease and its consequences. This illustrates a limitation of vaccine study protocols: as these are usually designed to find pathogen-specific effects, the possibility of important non-specific effects cannot be assessed.

Factors affecting vaccine protection

The level of protection afforded by vaccination is affected by many genetic and environmental factors, including age, maternal antibody levels, prior antigen exposure, vaccine schedule and vaccine dose. Although most of these factors cannot be readily modified, age of vaccination and schedule of vaccination are important and key factors in planning immunization programmes. The vaccine dose is established during early clinical development, based on optimal safety and immunogenicity. However, for some populations, such as older adults, a higher dose might be beneficial, as has been shown for the influenza vaccine 69 , 70 . Moreover, intradermal vaccination has been shown to be immunogenic at much lower (fractional) doses than intramuscular vaccination for influenza, rabies and HBV vaccines 71 .

Age of vaccination

The highest burden of and mortality from infectious disease occur in the first 5 years of life, with the youngest infants being most affected. For this reason, immunization programmes have largely focused on this age group where there is the greatest benefit from vaccine-induced protection. Although this makes sense from an epidemiological perspective, it is somewhat inconvenient from an immunological perspective as the induction of strong immune responses in the first year of life is challenging. Indeed, vaccination of older children and adults would induce stronger immune responses, but would be of little value if those who would have benefited from vaccination have already succumbed to the disease.

It is not fully understood why immune responses to vaccines are not as robust in early infancy as they are in older children. One factor, which is increasingly well documented, is interference from maternal antibody 72 — acquired in utero through the placenta — which might reduce antigen availability, reduce viral replication (in the case of live viral vaccines such as measles 73 ) or perhaps regulate B cell responses. However, there is also evidence that there is a physiological age-dependent increase in antibody responses in infancy 72 . Furthermore, bone marrow niches to support B cells are limited in infancy, which might explain the very short-lived immune responses that are documented in the first year of life 74 . For example, after immunization with 2 doses of the capsular group C meningococcal vaccine in infancy, only 41% of infants still had protective levels of antibody by the time of the booster dose, administered 7 months later 75 .

In the case of T cell-independent antigens — in other words, plain polysaccharides from Hib, typhoid-causing bacteria, meningococci and pneumococci — animal data indicate that antibody responses depend on development of the marginal zone of the spleen, which is required for the maturation of marginal zone B cells, and this does not occur until around 18 months of age in human infants 76 . These plain polysaccharide vaccines do not induce memory B cells (Fig.  6 ) and, even in adults, provide protection for just 2–3 years, with protection resulting from antibody produced by plasma cells derived from marginal zone B cells 77 . However, converting plain polysaccharide vaccines into T cell-dependent protein–polysaccharide conjugate vaccines, which are immunogenic from 2 months of age and induce immune memory, has transformed prevention of disease caused by the encapsulated bacteria (pneumococci, Hib and meningococci) over the past three decades 78 . These are the most important invasive bacterial pathogens of childhood, causing most cases of childhood meningitis and bacterial pneumonia, and the development of the conjugate vaccine technology in the 1980s has transformed global child health 9 .

figure 6

a | Polysaccharide vaccines induce antibody-producing plasma cells by cross-linking the B cell receptor (BCR). However, affinity maturation of the antibody response and the induction of memory B cells do not occur. b | Protein–polysaccharide conjugate vaccines can engage T cells that recognize the carrier protein, as well as B cells that recognize the polysaccharide. T cells provide help to B cells, leading to affinity maturation and the production of both plasma cells and memory B cells. TCR, T cell receptor. Adapted from ref. 35 , Springer Nature Limited.

Immune responses are also poor in the older population and most of the vaccines used in older adults offer limited protection or a limited duration of protection, particularly among those older than 75 years of age. The decline in immune function with age (known as immunosenescence) has been well documented 79 but, despite the burden of infection in this age group and the increasing size of the population, has not received sufficient attention so far amongst immunologists and vaccinologists. Interestingly, some have raised the hypothesis that chronic infection with cytomegalovirus (CMV) might have a role in immunosenescence through unfavourable effects on the immune system, including clonal expansion of CMV-specific T cell populations, known as ‘memory inflation’, and reduced diversity of naive T cells 80 , 81 .

In high-income countries, many older adults receive influenza, pneumococcal and varicella zoster vaccines, although data showing substantial benefits of these vaccines in past few decades in the oldest adults (more than 75 years of age) are lacking. However, emerging data following the recent development and deployment of new-generation, high-dose or adjuvanted influenza vaccines 82 and an adjuvanted glycoprotein varicella zoster vaccine 83 suggest that the provision of additional signals to the immune system by certain adjuvants (such as AS01 and MF59) can overcome immunosenescence. It is now necessary to understand how and why, and to use this knowledge to expand options for vaccine-induced protection at the extremes of life.

Schedule of vaccination

For most vaccines that are used in the first year of life, 3–4 doses are administered by 12 months of age. Conventionally, in human vaccinology, ‘priming’ doses are all those administered at less than 6 months of age and the ‘booster’ dose is given at 9–12 months of age. So, for example, the standard WHO schedule for diphtheria–tetanus–pertussis-containing vaccines (which was introduced in 1974 as part of the Expanded Programme on Immunization 84 ) consists of 3 priming doses at 6, 10 and 14 weeks of age with no booster. This schedule was selected to provide early protection before levels of maternal antibody had waned (maternal antibody has a half-life of around 30–40 days 85 , so very little protection is afforded to infants from the mother beyond 8–12 weeks of age) and because it was known that vaccine compliance is better when doses are given close together. However, infant immunization schedules around the world are highly variable — few high-income or middle-income countries use the Expanded Programme on Immunization schedule — and were largely introduced with little consideration of how best to optimize immune responses. Indeed, schedules that start later at 8–12 weeks of age (when there is less interference from maternal antibody) and have longer gaps between doses (8 weeks rather than 4 weeks) are more immunogenic. A large number of new vaccines have been introduced since 1974 as a result of remarkable developments in technology, but these have generally been fitted into existing schedules without taking into account the optimal scheduling for these new products. The main schedules used globally for diphtheria–tetanus–pertussis vaccine are presented in Supplementary Table 1 , and the changes to the UK immunization schedule since 1963 are presented in Supplementary Table 2 . It should also be noted that surveys show vaccines are rarely delivered on schedule in many countries and, thus, the published schedule may not be how vaccines are actually delivered on the ground. This is particularly the case in remote areas (for example, where health professionals only visit occasionally) and regions with limited or chaotic health systems, leaving children vulnerable to infection.

Safety and side effects of vaccines

Despite the public impression that vaccines are associated with specific safety concerns, the existing data indicate that vaccines are remarkably safe as interventions to defend human health. Common side effects, particularly those associated with the early innate immune response to vaccines, are carefully documented in clinical trials. Although rare side effects might not be identified in clinical trials, vaccine development is tightly controlled and robust post-marketing surveillance systems are in place in many countries, which aim to pick these up if they do occur. This can make the process of vaccine development rather laborious but is appropriate because, unlike most drugs, vaccines are used for prophylaxis in a healthy population and not to treat disease. Perhaps because vaccines work so well and the diseases that they prevent are no longer common, there have been several spurious associations made between vaccines and various unrelated health conditions that occur naturally in the population. Disentangling incorrect claims of vaccine harm from true vaccine-related adverse events requires very careful epidemiological studies.

Common side effects

Licensure of a new vaccine normally requires safety studies involving from 3,000 to tens of thousands of individuals. Thus, common side effects are very well known and are published by the regulator at the time of licensure. Common side effects of many vaccines include injection site pain, redness and swelling and some systemic symptoms such as fever, malaise and headache. All of these side effects, which occur in the first 1–2 days following vaccination, reflect the inflammatory and immune responses that lead to the successful development of vaccine-induced protection. About 6 days after measles–mumps–rubella vaccination, about 10% of 12-month-old infants develop a mild viraemia, which can result in fever and rash, and occasionally febrile convulsions (1 in 3,000) 86 . Although these side effects are self-limiting and relatively mild — and are trivial in comparison with the high morbidity and mortality of the diseases from which the vaccines protect — they can be very worrying for parents and their importance is often underestimated by clinicians who are counselling families about immunization.

Immunodeficiency and vaccination

Most vaccines in current use are inactivated, purified or killed organisms or protein and/or polysaccharide components of a pathogen; as they cannot replicate in the vaccine recipient, they are thus not capable of causing any significant side effects, resulting in very few contraindications for their use. Even in immunocompromised individuals, there is no risk from use of these vaccines, although the induction of immunity may not be possible, depending on the nature of the immune system defect. More caution is required for the use of live attenuated, replicating vaccines (such as yellow fever, varicella zoster, BCG and measles vaccines) in the context of individuals with T cell immunodeficiency as there is a theoretical risk of uncontrolled replication, and live vaccines are generally avoided in this situation 87 . A particular risk of note is from the yellow fever vaccine, which is contraindicated in individuals with T cell immunodeficiency and occasionally causes a severe viscerotropic or neurotropic disease in individuals with thymus disease or after thymectomy, in young infants and adults more than 60 years of age 88 . In individuals with antibody deficiency, there may be some merit in the use of routine live vaccines, as T cell memory may be induced that, although unlikely to prevent future infection, could improve control of the disease if infection occurs.

The myth of antigenic overload

An important parental concern is that vaccines might overwhelm their children’s immune systems. In a telephone survey in the USA, 23% of parents agreed with the statement ‘Children get more immunizations than are good for them’, and 25% indicated that they were concerned that their child’s immune system could be weakened by too many immunizations 89 . However, there is ample evidence to disprove these beliefs. Although the number of vaccines in immunization programmes has increased, the total number of antigens has actually decreased from more than 3,200 to approximately 320 as a result of discontinuing the smallpox vaccine and replacing the whole-cell pertussis vaccine with the acellular vaccine 90 , 91 . Vaccines comprise only a small fraction of the antigens that children are exposed to throughout normal life, with rapid bacterial colonization of the gastrointestinal tract after birth, multiple viral infections and environmental antigens. Moreover, multiple studies have shown that children who received vaccinations had a similar, or even reduced, risk of unconnected infections in the following period 92 , 93 , 94 , 95 . Looking at children who presented to the emergency department with infections not included in the vaccine programme, there was no difference in terms of their previous antigen exposure by vaccination 96 .

Significant rare side effects

Serious side effects from vaccines are very rare, with anaphylaxis being the most common of these rare side effects for parenteral vaccines , occurring after fewer than one in a million doses 97 . Individuals with known allergies (such as egg or latex) should avoid vaccines that may have traces of these products left over from the production process with the specific allergen, although most cases of anaphylaxis are not predictable in advance but are readily managed if vaccines are administered by trained health-care staff.

Very rare side effects of vaccines are not usually observed during clinical development, with very few documented, and they are only recognized through careful surveillance in vaccinated populations. For example, there is a very low risk of idiopathic thrombocytopenic purpura (1 in 24,000 vaccine recipients) after measles vaccination 86 . From 1 in 55,000 to 1 in 16,000 recipients of an AS03-adjuvanted 2009 pandemic H1N1 influenza vaccine 98 , 99 , who had a particular genetic susceptibility (HLA DQB1*0602) 100 , developed narcolepsy , although the debate continues about whether the trigger was the vaccine, the adjuvant or some combination, perhaps with the circulating virus also having a role.

Despite widespread misleading reporting about links between the measles–mumps–rubella vaccine and autism from the end of the 1990s, there is no evidence that any vaccines or their components cause autism 101 , 102 . Indeed, the evidence now overwhelmingly shows that there is no increased risk of autism in vaccinated populations. Thiomersal (also known as thimerosal) is an ethyl mercury-containing preservative that has been used widely in vaccines since the 1930s without any evidence of adverse events associated with it, and there is also no scientific evidence of any link between thiomersal and autism despite spurious claims about this 102 . Thiomersal has been voluntarily withdrawn from most vaccines by manufacturers as a precautionary measure rather than because of any scientific evidence of lack of safety and is currently used mainly in the production of whole-cell pertussis vaccines.

The risk of hospitalization, death or long-term morbidity from the diseases for which vaccines have been developed is so high that the risks of common local and systemic side effects (such as sore arm and fever) and the rare more serious side effects are far outweighed by the massive reductions in disease achieved through vaccination. Continuing assessment of vaccine safety post licensure is important for the detection of rare and longer-term side effects, and efficient reporting systems need to be in place to facilitate this 103 . This is particularly important in a pandemic situation, such as the COVID-19 pandemic, as rapid clinical development of several vaccines is likely to take place and large numbers of people are likely to be vaccinated within a short time.

Challenges to vaccination success

Vaccines only work if they are used. Perhaps the biggest challenge to immunization programmes is ensuring that the strong headwinds against deployment, ranging from poor infrastructure and lack of funding to vaccine hesitancy and commercial priorities, do not prevent successful protection of the most vulnerable in society. It is noteworthy that these are not classical scientific challenges, although limited knowledge about which antigens are protective, which immune responses are needed for protection and how to enhance the right immune responses, particularly in the older population, are also important considerations.

Access to vaccines

The greatest challenge for protection of the human population against serious infectious disease through vaccination remains access to vaccines and the huge associated inequity in access. Access to vaccines is currently limited, to varying degrees in different regions, by the absence of a health infrastructure to deliver vaccines, the lack of convenient vaccine provision for families, the lack of financial resources to purchase available vaccines (at a national, local or individual level) and the marginalization of communities in need. This is perhaps the most pressing issue for public health, with global vaccine coverage having stalled; for example, coverage for diphtheria–tetanus–pertussis-containing vaccines has only risen from 84% to 86% since 2010 (ref. 104 ). However, this figure hides huge regional variation, with near 100% coverage in some areas and almost no vaccinated children in others. For the poorest countries in the world, Gavi, the Vaccine Alliance provides funding to assist with new vaccine introductions and has greatly accelerated the broadening of access to new vaccines that were previously only accessible to high-income countries. However, this still leaves major financial challenges for countries that do not meet the criteria to be eligible for Gavi funding but still cannot afford new vaccines. Inequity remains, with approximately 14 million children not receiving any vaccinations and another 5.7 million children being only partially vaccinated in 2019 (ref. 105 ).

Other important issues can compromise vaccine availability and access. For example, most vaccines must be refrigerated at 2–8 °C, requiring the infrastructure and capacity for cold storage and a cold chain to the clinic where the vaccine is delivered, which is limited in many low-income countries. The route of administration can also limit access; oral vaccines (such as rotavirus, polio or cholera vaccines) and nasal vaccines (such as live attenuated influenza vaccine) can be delivered rapidly on a huge scale by less-skilled workers, whereas most vaccines are injected, which requires more training to administer and takes longer. Nevertheless, these hurdles can be overcome: in Sindh Province, Pakistan, 10 million doses of injected typhoid conjugate vaccine were administered to children to control an outbreak of extensively drug-resistant typhoid in just a few weeks at the end of 2019 (ref. 106 ).

The anti-vaccination movement

Despite access being the main issue affecting global vaccine coverage, a considerable focus is currently on the challenges posed by the anti-vaccination movement, largely as a result of worrying trends of decreasing vaccine coverage in high-income settings, leading to outbreaks of life-threatening infectious diseases, such as measles. In 2018, there were 140,000 deaths from measles worldwide, and the number of cases in 2019 was the highest in any year since 2006 (ref. 107 ). Much has been written about the dangerous role of social media and online search engines in the spread of misinformation about vaccines and the rise of the anti-vaccination movement, but scientists are also at fault for failing to effectively communicate the benefits of vaccination to a lay public. If this is to change, scientists do not need to counter or engage with the anti-vaccination movement but to use their expertise and understanding to ensure effective communication about the science that underpins our remarkable ability to harness the power of the immune system through vaccination to defend the health of our children.

Commercial viability

A third important issue is the lack of vaccines for some diseases for which there is no commercial incentive for development. Typically, these are diseases that have a restricted geographical spread (such as Rift Valley fever, Ebola, Marburg disease or plague) or occur in sporadic outbreaks and only affect poor or displaced communities (such as Ebola and cholera). Lists of outbreak pathogens have been published by various agencies including the WHO 108 , and recent funding initiatives, including those from US and European governments, have increased investment in the development of orphan vaccines . The Coalition for Epidemic Preparedness Innovations (CEPI) is set to have a major role in funding and driving the development of vaccines against these pathogens.

Immunological challenges

For other pathogens, there is likely to be a commercial market but there are immunological challenges for the development of new vaccines. For example, highly variable pathogens, including some with a large global distribution such as HIV and hepatitis C virus, pose a particular challenge. The genetic diversity of these pathogens, which occurs both between and within hosts, makes it difficult to identify an antigen that can be used to immunize against infection. In the case of HIV, antibodies can be generated that neutralize the virus, but the rapid mutation of the viral genome means that the virus can evade these responses within the same host. Some individuals do produce broadly neutralizing antibodies naturally, which target more conserved regions of the virus, leading to viral control, but it is not clear how to robustly induce these antibodies with a vaccine. Indeed, several HIV vaccines have been tested in clinical trials that were able to induce antibody responses (for example, RV144 vaccine showed 31% protection 109 ) and/or T cell responses, but these vaccines have not shown consistent evidence of protection in follow-up studies, and several studies found an increased risk of infection among vaccine recipients 110 .

For other pathogens, such as Neisseria gonorrhoeae (which causes gonorrhoea) and Treponema pallidum (which causes syphilis), antigenic targets for protective immune responses have not yet been determined, partly owing to limited investment and a poor understanding of the mechanisms of immunity at mucosal surfaces, or have thus far only resulted in limited protection. For example, the licensed malaria vaccine, RTSS, provides only 30–40% protection and further work is needed to develop suitable products 111 . New malaria vaccines in development target more conserved antigens on the parasite surface or target different stages of the parasite life cycle. Combinations of these approaches in a vaccine (perhaps targeting multiple stages of the life cycle), together with anti-vector strategies such as the use of genetically modified mosquitoes or Wolbachia bacteria to infect mosquitoes and reduce their ability to carry mosquito parasites 112 , as well as mosquito-bite avoidance, have the potential to markedly reduce malaria parasite transmission.

Seasonal influenza vaccines have, in recent decades, been used to protect vulnerable individuals in high-income countries, including older adults, children and individuals with co-morbidities that increase risk of severe influenza. These vaccines are made from virus that is grown in eggs; purified antigen, split virions or whole virions can be included in the final vaccine product. The vaccines take around 6 months to manufacture and have highly variable efficacy from one season to another, partly owing to the difficulty in predicting which virus strain will be circulating in the next influenza season, so that the vaccine strain may not match the strain causing disease 113 . Another issue that is increasingly recognized is egg adaptation, whereby the vaccine strain of virus becomes adapted to the egg used for production, leading to key mutations that mean it is not well matched to, and does not protect against, the circulating viral strain 114 . Vaccine-induced protection might be improved by the development of mammalian or insect cell-culture systems for growing influenza virus to avoid egg adaptation, and the use of MF59-adjuvanted vaccines and high-dose influenza vaccines to improve immune responses. Because of the cost of purchasing seasonal influenza vaccines annually, and the problem of antigenic variability, the search for a universal influenza vaccine receives considerable attention, with a particular focus on vaccines that induce T H cells or antibodies to conserved epitopes 115 , but there are currently no products in late-stage development.

Although BCG is the most widely used vaccine globally, with 89% of the world population receiving it in 2018 (ref. 105 ), there is still a huge global burden of TB and it is clear that more effective TB vaccines are needed. However, the optimal characteristics of a prophylactic TB vaccine, which antigens should be included and the nature of protective immunity remain unknown, despite more than 100 years of TB vaccine research. A viral vector expressing a TB protein, 85A, has been tested in a large TB-prevention trial in South Africa but this vaccine did not show protection, which was attributed by the authors to poor immunogenicity in the vaccinated children 116 . However, the publication of a study in 2019 showing that a novel TB vaccine, M72/AS01E (an AS01-adjuvanted vaccine containing the M. tuberculosis antigens MTB32A and MTB39A), could limit progression to active TB disease in latently infected individuals with efficacy of 50% over 3 years gives a glimmer of hope that TB control may be realized in the future by novel vaccine approaches 117 . Questions remain about the duration of the effect, but the demonstrated efficacy can now be interrogated thoroughly to determine the nature of protective immunity against TB.

Future vaccine development

There are several important diseases for which new vaccines are needed to reduce morbidity and mortality globally, which are likely to have a market in both high-income and low-income countries, including vaccines for group B Streptococcus (a major cause of neonatal meningitis), RSV and CMV. Group B Streptococcus vaccines are currently in trials of maternal vaccination, with the aim of inducing maternal antibodies that cross the placenta and protect the newborn passively 118 . RSV causes a lower respiratory tract infection, bronchiolitis, in infancy and is the commonest cause of infant hospitalization in developed countries and globally one of the leading causes of death in those less than 12 months of age. As many as 60 new RSV vaccine candidates are in development as either maternal vaccines or infant vaccines, or involving immunization with RSV-specific monoclonal antibodies that have an extended half-life. A licensed RSV vaccine would have a huge impact on infant health and paediatric hospital admissions. CMV is a ubiquitous herpesvirus that is responsible for a significant burden of disease in infants; 15–20% of congenitally infected children develop long-term sequelae, most importantly sensorineural hearing loss, and CMV thus causes more congenital disease than any other single infectious agent. A vaccine that effectively prevents congenital infection would provide significant individual and public health benefits. A lack of understanding of the nature of protective immunity against CMV has hampered vaccine development in the past, but the pipeline is now more promising 119 , 120 .

Another major line of development of new vaccines is to combat hospital-acquired infections, particularly with antibiotic-resistant Gram-positive bacteria (such as Staphylococcus aureus ) that are associated with wound infections and intravenous catheters and various Gram-negative organisms (such as Klebsiella spp. and Pseudomonas aeruginosa ). Progress has been slow in this field and an important consideration will be targeting products to the at-risk patient groups before hospital admission or surgery.

Perhaps the largest area of growth for vaccine development is for older adults, with few products aimed specifically at this population currently. With the population of older adults set to increase substantially (the proportion of the population who are more than 60 years of age is expected to increase from 12% to 22% by 2050 (ref. 121 )), prevention of infection in this population should be a public health priority. Efforts to better understand immunosenescence and how to improve vaccine responses in the oldest adults are a major challenge for immunologists today.

Novel technologies

Important challenges to overcome in the following years are genetic diversity (for example, of viruses such as HIV, hepatitis C virus and influenza), the requirement for a broader immune response including T cells for protection against diseases such as TB and malaria, and the need to swiftly respond to emerging pathogens and outbreak situations. Traditionally, vaccine development takes more than 10 years 122 , but the COVID-19 pandemic has demonstrated the urgency for vaccine technologies that are flexible and facilitate rapid development, production and upscaling 123 .

Novel technologies to combat these hurdles will include platforms that allow for improved antigen delivery and ease and speed of production, application of structural biology and immunological knowledge to aid enhanced antigen design and discovery of better adjuvants to improve immunogenicity. Fortunately, recent advances in immunology, systems biology, genomics and bio-informatics offer great opportunities to improve our understanding of the induction of immune responses by vaccines and to transform vaccine development through increasingly rational design 124 .

New platforms include viral vectored vaccines and nucleic acid-based vaccines. Antigen-presenting cells such as dendritic cells, T cell-based vaccines and bacterial vectors are being explored as well, but are still at early stages of development for use against infectious pathogens. Whereas classic whole-organism vaccine platforms require the cultivation of the pathogen, next-generation viral vectored or nucleic acid-based vaccines can be constructed using the pathogen genetic sequence only, thereby significantly increasing the speed of development and manufacturing processes 125 .

Viral vectored vaccines are based on a recombinant virus (either replicating or not), in which the genome is altered to express the target pathogen antigen. The presentation of pathogen antigens in combination with stimuli from the viral vector that mimic natural infection leads to the induction of strong humoral and cellular immune responses without the need for an adjuvant. A potential disadvantage of viral vectored vaccines is the presence of pre-existing immunity when a vector such as human adenovirus is used that commonly causes infection in humans. This can be overcome by using vectors such as a simian adenovirus, against which almost no pre-existing immunity exists in humans 126 . Whether immune responses against the vector will limit its use for repeated vaccinations with different antigens will need to be investigated.

Nucleic acid-based vaccines consist of either DNA or RNA encoding the target antigen, which potentially allows for the induction of both humoral and cellular immune responses once the encoded antigens are expressed by the vaccine recipient after uptake of the nucleic acid by their cells. A huge advantage of these vaccines is that they are highly versatile and quick and easy to adapt and produce in the case of an emerging pathogen. Indeed, the SARS-CoV-2 mRNA-based vaccine mRNA-1273 entered clinical testing just 2 months after the genetic sequence of SARS-CoV-2 was identified 127 and the BNT162b2 lipid nanoparticle-formulated, nucleoside-modified RNA vaccine was the first SARS-CoV-2 vaccine to be licensed 128 . One of the disadvantages of these vaccines is that they need to be delivered directly into cells, which requires specific injection devices, electroporation or a carrier molecule and brings with it a risk of low transfection rate and limited immunogenicity 129 . Furthermore, the application of RNA vaccines has been limited by their lack of stability and requirement for a cold chain, but constant efforts to improve formulations hold promise to overcome these limitations 130 , 131 .

A beautiful example of how immunological insight can revolutionize vaccine development is the novel RSV vaccine DS-Cav1. The RSV surface fusion (F) protein can exist in either a pre-fusion (pre-F) conformation, which facilitates viral entry, or a post-fusion (post-F) form. Whereas previous vaccines mainly contained the post-F form, insight into the atomic-level structure of the protein has allowed for stable expression of the pre-F protein, leading to strongly enhanced immune responses and providing a proof of concept for structure-based vaccine design 132 , 133 .

In addition to the novel vaccine platforms mentioned above, there are ongoing efforts to develop improved methods of antigen delivery, such as liposomes (spherical lipid bilayers), polymeric particles, inorganic particles, outer membrane vesicles and immunostimulating complexes. These, and other methods such as self-assembling protein nanoparticles, have the potential to optimally enhance and skew the immune response to pathogens against which traditional vaccine approaches have proven to be unsuccessful 129 , 134 . Furthermore, innovative delivery methods, such as microneedle patches, are being developed, with the potential advantages of improved thermostability, ease of delivery with minimal pain and safer administration and disposal 135 . An inactivated influenza vaccine delivered by microneedle patch was shown to be well tolerated and immunogenic in a phase I trial 136 . This might allow for self-administration, although it would be important for professional medical care to be available if there is a risk of severe side effects such as anaphylaxis.

Conclusions and future directions

Immunization protects populations from diseases that previously claimed the lives of millions of individuals each year, mostly children. Under the United Nations Convention on the Rights of the Child, every child has the right to the best possible health, and by extrapolation a right to be vaccinated.

Despite the outstanding success of vaccination in protecting the health of our children, there are important knowledge gaps and challenges to be addressed. An incomplete understanding of immune mechanisms of protection and the lack of solutions to overcome antigenic variability have hampered the design of effective vaccines against major diseases such as HIV/AIDS and TB. Huge efforts have resulted in the licensure of a partially effective vaccine against malaria, but more effective vaccines will be needed to defeat this disease. Moreover, it is becoming clear that variation in host response is an important factor to take into account. New technologies and analytical methods will aid the delineation of the complex immune mechanisms involved, and this knowledge will be important to design effective vaccines for the future.

Apart from the scientific challenges, sociopolitical barriers stand in the way of safe and effective vaccination for all. Access to vaccines is one of the greatest obstacles, and improving infrastructure, continuing education and enhancing community engagement will be essential to improve this, and novel delivery platforms that eliminate the need for a cold chain could have great implications. There is a growing subset of the population who are sceptical about vaccination and this requires a response from the scientific community to provide transparency about the existing knowledge gaps and strategies to overcome these. Constructive collaboration between scientists and between scientific institutions, governments and industry will be imperative to move forwards. The COVID-19 pandemic has indeed shown that, in the case of an emergency, many parties with different incentives can come together to ensure that vaccines are being developed at unprecedented speed but has also highlighted some of the challenges of national and commercial interests. As immunologists, we have a responsibility to create an environment where immunization is normal, the science is accessible and robust, and access to vaccination is a right and expectation.

Change history

05 january 2021.

A Correction to this paper has been published: https://doi.org/10.1038/s41577-020-00497-5.

World Health Organization. Global vaccine action plan 2011–2020. WHO https://www.who.int/immunization/global_vaccine_action_plan/GVAP_doc_2011_2020/en/ (2013).

World Health Organization. Child mortality and causes of death. WHO https://www.who.int/gho/child_health/mortality/mortality_under_five_text/en/ (2020).

Hatherill, M., White, R. G. & Hawn, T. R. Clinical development of new TB vaccines: recent advances and next steps. Front. Microbiol. 10 , 3154 (2019).

Article   PubMed   Google Scholar  

Bekker, L. G. et al. The complex challenges of HIV vaccine development require renewed and expanded global commitment. Lancet 395 , 384–388 (2020).

Matz, K. M., Marzi, A. & Feldmann, H. Ebola vaccine trials: progress in vaccine safety and immunogenicity. Expert Rev. Vaccines 18 , 1229–1242 (2019).

Article   CAS   PubMed   Google Scholar  

Ahmed, S. F., Quadeer, A. A. & McKay, M. R. Preliminary identification of potential vaccine targets for the COVID-19 coronavirus (SARS-CoV-2) based on SARS-CoV immunological studies. Viruses 12 , 254 (2020).

Article   CAS   PubMed Central   Google Scholar  

Pawelec, G. Age and immunity: what is “immunosenescence”? Exp. Gerontol. 105 , 4–9 (2018).

Larson, H. J. The state of vaccine confidence. Lancet 392 , 2244–2246 (2018).

Robbins, J. B. et al. Prevention of invasive bacterial diseases by immunization with polysaccharide–protein conjugates. Curr. Top. Microbiol. Immunol. 146 , 169–180 (1989).

CAS   PubMed   Google Scholar  

Plotkin, S. A. Updates on immunologic correlates of vaccine-induced protection. Vaccine 38 , 2250–2257 (2020). This paper presents a review of immune correlates of protection for specific infections, their immunological basis and relevance for vaccinology .

Rubin, L. G. et al. 2013 IDSA clinical practice guideline for vaccination of the immunocompromised host. Clin. Infect. Dis. 58 , e44–e100 (2014).

Milligan, R., Paul, M., Richardson, M. & Neuberger, A. Vaccines for preventing typhoid fever. Cochrane Database Syst. Rev. 5 , CD001261 (2018).

PubMed   Google Scholar  

WHO. Measles vaccines: WHO position paper — April 2017. Wkly. Epidemiol. Rec. 92 , 205–227 (2017).

Google Scholar  

Rappuoli, R., Mandl, C. W., Black, S. & De Gregorio, E. Vaccines for the twenty-first century society. Nat. Rev. Immunol. 11 , 865–872 (2011). This paper presents a review of the role of vaccines in the twenty-first century, with an emphasis on increased life expectancy, emerging infections and poverty .

Article   CAS   PubMed   PubMed Central   Google Scholar  

Marrack, P., McKee, A. S. & Munks, M. W. Towards an understanding of the adjuvant action of aluminium. Nat. Rev. Immunol. 9 , 287–293 (2009).

Wilkins, A. L. et al. AS03- and MF59-adjuvanted influenza vaccines in children. Front. Immunol. 8 , 1760 (2017).

Article   PubMed   PubMed Central   CAS   Google Scholar  

Kaslow, D. C. & Biernaux, S. RTS,S: toward a first landmark on the Malaria Vaccine Technology Roadmap. Vaccine 33 , 7425–7432 (2015).

Pedersen, C. et al. Immunization of early adolescent females with human papillomavirus type 16 and 18 L1 virus-like particle vaccine containing AS04 adjuvant. J. Adolesc. Health 40 , 564–571 (2007).

Mitkus, R. J., Hess, M. A. & Schwartz, S. L. Pharmacokinetic modeling as an approach to assessing the safety of residual formaldehyde in infant vaccines. Vaccine 31 , 2738–2743 (2013).

Eldred, B. E., Dean, A. J., McGuire, T. M. & Nash, A. L. Vaccine components and constituents: responding to consumer concerns. Med. J. Aust. 184 , 170–175 (2006).

Fijen, C. A., Kuijper, E. J., te Bulte, M. T., Daha, M. R. & Dankert, J. Assessment of complement deficiency in patients with meningococcal disease in The Netherlands. Clin. Infect. Dis. 28 , 98–105 (1999).

Wara, D. W. Host defense against Streptococcus pneumoniae : the role of the spleen. Rev. Infect. Dis. 3 , 299–309 (1981).

Gershon, A. A. et al. Varicella zoster virus infection. Nat. Rev. Dis. Prim. 1 , 15016 (2015).

Sandmann, F. et al. Infant hospitalisations and fatalities averted by the maternal pertussis vaccination programme in England, 2012–2017: post-implementation economic evaluation. Clin. Infect. Dis. 71 , 1984–1987 (2020).

Demicheli, V., Barale, A. & Rivetti, A. Vaccines for women for preventing neonatal tetanus. Cochrane Database Syst. Rev. 7 , CD002959 (2015).

Madhi, S. A. et al. Influenza vaccination of pregnant women and protection of their infants. N. Engl. J. Med. 371 , 918–931 (2014).

Article   PubMed   CAS   Google Scholar  

Madhi, S. A. & Dangor, Z. Prospects for preventing infant invasive GBS disease through maternal vaccination. Vaccine 35 , 4457–4460 (2017).

Madhi, S. A. et al. Respiratory syncytial virus vaccination during pregnancy and effects in infants. N. Engl. J. Med. 383 , 426–439 (2020).

Young, M. K. & Cripps, A. W. Passive immunization for the public health control of communicable diseases: current status in four high-income countries and where to next. Hum. Vaccin. Immunother. 9 , 1885–1893 (2013).

Patel, M. & Lee, C. K. Polysaccharide vaccines for preventing serogroup A meningococcal meningitis. Cochrane Database Syst. Rev. 3 , CD001093 (2005).

Moberley, S., Holden, J., Tatham, D. P. & Andrews, R. M. Vaccines for preventing pneumococcal infection in adults. Cochrane Database Syst. Rev. 1 , CD000422 (2013).

Andrews, N. J. et al. Serotype-specific effectiveness and correlates of protection for the 13-valent pneumococcal conjugate vaccine: a postlicensure indirect cohort study. Lancet Infect. Dis. 14 , 839–846 (2014).

Borrow, R., Abad, R., Trotter, C., van der Klis, F. R. & Vazquez, J. A. Effectiveness of meningococcal serogroup C vaccine programmes. Vaccine 31 , 4477–4486 (2013).

Ramsay, M. E., McVernon, J., Andrews, N. J., Heath, P. T. & Slack, M. P. Estimating haemophilus influenzae type b vaccine effectiveness in England and Wales by use of the screening method. J. Infect. Dis. 188 , 481–485 (2003).

Pollard, A. J., Perrett, K. P. & Beverley, P. C. Maintaining protection against invasive bacteria with protein-polysaccharide conjugate vaccines. Nat. Rev. Immunol. 9 , 213–220 (2009). This paper presents a review of the mechanism of action of polysaccharide vaccines and their role in establishing long-term protection against invasive bacteria .

Darton, T. C. et al. Design, recruitment, and microbiological considerations in human challenge studies. Lancet Infect. Dis. 15 , 840–851 (2015). This paper presents an overview of human challenge models, their potential use and their role in improving our understanding of disease mechanisms and host responses .

Suscovich, T. J. et al. Mapping functional humoral correlates of protection against malaria challenge following RTS, S/AS01 vaccination. Sci. Transl Med. 12 , eabb4757 (2020).

Jin, C. et al. Efficacy and immunogenicity of a Vi–tetanus toxoid conjugate vaccine in the prevention of typhoid fever using a controlled human infection model of Salmonella Typhi : a randomised controlled, phase 2b trial. Lancet 390 , 2472–2480 (2017).

Kourtis, A. P., Read, J. S. & Jamieson, D. J. Pregnancy and infection. N. Engl. J. Med. 370 , 2211–2218 (2014).

Malley, R. et al. CD4 + T cells mediate antibody-independent acquired immunity to pneumococcal colonization. Proc. Natl Acad. Sci. USA 102 , 4848–4853 (2005).

Henry, B. & Baclic, O. & National Advisory Committee on Immunization (NACI). Summary of the NACI update on the recommended use of hepatitis B vaccine. Can. Commun. Dis. Rep. 43 , 104–106 (2017).

Kelly, D. F., Pollard, A. J. & Moxon, E. R. Immunological memory: the role of B cells in long-term protection against invasive bacterial pathogens. JAMA 294 , 3019–3023 (2005).

McVernon, J., Johnson, P. D., Pollard, A. J., Slack, M. P. & Moxon, E. R. Immunologic memory in Haemophilus influenzae type b conjugate vaccine failure. Arch. Dis. Child. 88 , 379–383 (2003).

McVernon, J. et al. Immunologic memory with no detectable bactericidal antibody response to a first dose of meningococcal serogroup C conjugate vaccine at four years. Pediatr. Infect. Dis. J. 22 , 659–661 (2003).

World Health Organization. Tetanus vaccines: WHO position paper, February 2017 — recommendations. Vaccine 36 , 3573–3575 (2018).

Article   Google Scholar  

World Health Organization. Diphtheria vaccine: WHO position paper, August 2017 — recommendations. Vaccine 36 , 199–201 (2018).

Chen, Z. & He, Q. Immune persistence after pertussis vaccination. Hum. Vaccin. Immunother. 13 , 744–756 (2017).

Article   PubMed   PubMed Central   Google Scholar  

Burdin, N., Handy, L. K. & Plotkin, S. A. What is wrong with pertussis vaccine immunity? The problem of waning effectiveness of pertussis vaccines. Cold Spring Harb. Perspect. Biol. 9 , a029454 (2017).

WHO. Vaccines and vaccination against yellow fever: WHO Position Paper, June 2013 — recommendations. Vaccine 33 , 76–77 (2015).

Paunio, M. et al. Twice vaccinated recipients are better protected against epidemic measles than are single dose recipients of measles containing vaccine. J. Epidemiol. Community Health 53 , 173–178 (1999).

Zhu, S., Zeng, F., Xia, L., He, H. & Zhang, J. Incidence rate of breakthrough varicella observed in healthy children after 1 or 2 doses of varicella vaccine: results from a meta-analysis. Am. J. Infect. Control. 46 , e1–e7 (2018).

Halstead, S. B., Rojanasuphot, S. & Sangkawibha, N. Original antigenic sin in dengue. Am. J. Trop. Med. Hyg. 32 , 154–156 (1983).

Kim, J. H., Skountzou, I., Compans, R. & Jacob, J. Original antigenic sin responses to influenza viruses. J. Immunol. 183 , 3294–3301 (2009).

Vatti, A. et al. Original antigenic sin: a comprehensive review. J. Autoimmun. 83 , 12–21 (2017).

Statista Research Department. Herd immunity threshold for selected global diseases as of 2013. Statista https://www.statista.com/statistics/348750/threshold-for-herd-immunity-for-select-diseases/ (2013).

Plans-Rubio, P. The vaccination coverage required to establish herd immunity against influenza viruses. Prev. Med. 55 , 72–77 (2012).

Trotter, C. L., Andrews, N. J., Kaczmarski, E. B., Miller, E. & Ramsay, M. E. Effectiveness of meningococcal serogroup C conjugate vaccine 4 years after introduction. Lancet 364 , 365–367 (2004).

Trotter, C. L. & Maiden, M. C. Meningococcal vaccines and herd immunity: lessons learned from serogroup C conjugate vaccination programs. Expert. Rev. Vaccines 8 , 851–861 (2009).

Tabrizi, S. N. et al. Assessment of herd immunity and cross-protection after a human papillomavirus vaccination programme in Australia: a repeat cross-sectional study. Lancet Infect. Dis. 14 , 958–966 (2014).

Brisson, M. et al. Population-level impact, herd immunity, and elimination after human papillomavirus vaccination: a systematic review and meta-analysis of predictions from transmission-dynamic models. Lancet Public Health 1 , e8–e17 (2016).

Trunz, B. B., Fine, P. & Dye, C. Effect of BCG vaccination on childhood tuberculous meningitis and miliary tuberculosis worldwide: a meta-analysis and assessment of cost-effectiveness. Lancet 367 , 1173–1180 (2006).

Barker, L. & Hussey, G. The Immunological Basis for Immunization Series: Module 5: Tuberculosis (World Health Organization, 2011).

Eisenhut, M. et al. BCG vaccination reduces risk of infection with Mycobacterium tuberculosis as detected by γ interferon release assay. Vaccine 27 , 6116–6120 (2009).

Verrall, A. J. et al. Early clearance of Mycobacterium tuberculosis : the INFECT case contact cohort study in Indonesia. J. Infect. Dis. 221 , 1351–1360 (2020).

Pollard, A. J., Finn, A. & Curtis, N. Non-specific effects of vaccines: plausible and potentially important, but implications uncertain. Arch. Dis. Child. 102 , 1077–1081 (2017).

Higgins, J. P. et al. Association of BCG, DTP, and measles containing vaccines with childhood mortality: systematic review. BMJ 355 , i5170 (2016).

Mina, M. J. et al. Measles virus infection diminishes preexisting antibodies that offer protection from other pathogens. Science 366 , 599–606 (2019).

Mina, M. J., Metcalf, C. J., de Swart, R. L., Osterhaus, A. D. & Grenfell, B. T. Long-term measles-induced immunomodulation increases overall childhood infectious disease mortality. Science 348 , 694–699 (2015). This paper is an analysis of population-level data from high-income countries, showing a protective effect of measles vaccination on mortality from non-measles infectious diseases .

Falsey, A. R., Treanor, J. J., Tornieporth, N., Capellan, J. & Gorse, G. J. Randomized, double-blind controlled phase 3 trial comparing the immunogenicity of high-dose and standard-dose influenza vaccine in adults 65 years of age and older. J. Infect. Dis. 200 , 172–180 (2009).

DiazGranados, C. A. et al. Efficacy of high-dose versus standard-dose influenza vaccine in older adults. N. Engl. J. Med. 371 , 635–645 (2014).

Schnyder, J. L. et al. Fractional dose of intradermal compared to intramuscular and subcutaneous vaccination—a systematic review and meta-analysis. Travel. Med. Infect. Dis. 37 , 101868 (2020).

Voysey, M. et al. The influence of maternally derived antibody and infant age at vaccination on infant vaccine responses: an individual participant meta-analysis. JAMA Pediatr. 171 , 637–646 (2017).

Caceres, V. M., Strebel, P. M. & Sutter, R. W. Factors determining prevalence of maternal antibody to measles virus throughout infancy: a review. Clin. Infect. Dis. 31 , 110–119 (2000).

Belnoue, E. et al. APRIL is critical for plasmablast survival in the bone marrow and poorly expressed by early-life bone marrow stromal cells. Blood 111 , 2755–2764 (2008).

Pace, D. et al. Immunogenicity of reduced dose priming schedules of serogroup C meningococcal conjugate vaccine followed by booster at 12 months in infants: open label randomised controlled trial. BMJ 350 , h1554 (2015).

Timens, W., Boes, A., Rozeboom-Uiterwijk, T. & Poppema, S. Immaturity of the human splenic marginal zone in infancy. Possible contribution to the deficient infant immune response. J. Immunol. 143 , 3200–3206 (1989).

Peset Llopis, M. J., Harms, G., Hardonk, M. J. & Timens, W. Human immune response to pneumococcal polysaccharides: complement-mediated localization preferentially on CD21-positive splenic marginal zone B cells and follicular dendritic cells. J. Allergy Clin. Immunol. 97 , 1015–1024 (1996).

Claesson, B. A. et al. Protective levels of serum antibodies stimulated in infants by two injections of Haemophilus influenzae type b capsular polysaccharide–tetanus toxoid conjugate. J. Pediatr. 114 , 97–100 (1989).

Crooke, S. N., Ovsyannikova, I. G., Poland, G. A. & Kennedy, R. B. Immunosenescence and human vaccine immune responses. Immun. Ageing 16 , 25 (2019).

Nikolich-Žugich, J. Ageing and life-long maintenance of T-cell subsets in the face of latent persistent infections. Nat. Rev. Immunol. 8 , 512–522 (2008).

Kadambari, S., Klenerman, P. & Pollard, A. J. Why the elderly appear to be more severely affected by COVID-19: the potential role of immunosenescence and CMV. Rev. Med. Virol. 30 , e2144 (2020).

Domnich, A. et al. Effectiveness of MF59-adjuvanted seasonal influenza vaccine in the elderly: a systematic review and meta-analysis. Vaccine 35 , 513–520 (2017).

Lal, H. et al. Efficacy of an adjuvanted herpes zoster subunit vaccine in older adults. N. Engl. J. Med. 372 , 2087–2096 (2015).

World Health Assembly. The Expanded Programme on Immunization: the 1974 resolution by the World Health Assembly. Assign. Child. 69-72 , 87–88 (1985).

Voysey, M., Pollard, A. J., Sadarangani, M. & Fanshawe, T. R. Prevalence and decay of maternal pneumococcal and meningococcal antibodies: a meta-analysis of type-specific decay rates. Vaccine 35 , 5850–5857 (2017).

Farrington, P. et al. A new method for active surveillance of adverse events from diphtheria/tetanus/pertussis and measles/mumps/rubella vaccines. Lancet 345 , 567–569 (1995).

Pinto, M. V., Bihari, S. & Snape, M. D. Immunisation of the immunocompromised child. J. Infect. 72 (Suppl), S13–S22 (2016).

Seligman, S. J. Risk groups for yellow fever vaccine-associated viscerotropic disease (YEL-AVD). Vaccine 32 , 5769–5775 (2014).

Gellin, B. G., Maibach, E. W. & Marcuse, E. K. Do parents understand immunizations? A national telephone survey. Pediatrics 106 , 1097–1102 (2000).

Offit, P. A. et al. Addressing parents’ concerns: do multiple vaccines overwhelm or weaken the infant’s immune system? Pediatrics 109 , 124–129 (2002).

Centers for Disease Control and Prevention. Multiple vaccinations at once. CDC https://www.cdc.gov/vaccinesafety/concerns/multiple-vaccines-immunity.html (2020).

Stowe, J., Andrews, N., Taylor, B. & Miller, E. No evidence of an increase of bacterial and viral infections following measles, mumps and rubella vaccine. Vaccine 27 , 1422–1425 (2009).

Otto, S. et al. General non-specific morbidity is reduced after vaccination within the third month of life — the Greifswald study. J. Infect. 41 , 172–175 (2000).

Griffin, M. R., Taylor, J. A., Daugherty, J. R. & Ray, W. A. No increased risk for invasive bacterial infection found following diphtheria–tetanus–pertussis immunization. Pediatrics 89 , 640–642 (1992).

Aaby, P. et al. Non-specific beneficial effect of measles immunisation: analysis of mortality studies from developing countries. BMJ 311 , 481–485 (1995).

Glanz, J. M. et al. Association between estimated cumulative vaccine antigen exposure through the first 23 months of life and non-vaccine-targeted infections from 24 through 47 months of age. JAMA 319 , 906–913 (2018).

Bohlke, K. et al. Risk of anaphylaxis after vaccination of children and adolescents. Pediatrics 112 , 815–820 (2003).

Nohynek, H. et al. AS03 adjuvanted AH1N1 vaccine associated with an abrupt increase in the incidence of childhood narcolepsy in Finland. PLoS ONE 7 , e33536 (2012).

Miller, E. et al. Risk of narcolepsy in children and young people receiving AS03 adjuvanted pandemic A/H1N1 2009 influenza vaccine: retrospective analysis. BMJ 346 , f794 (2013).

Hallberg, P. et al. Pandemrix-induced narcolepsy is associated with genes related to immunity and neuronal survival. EBioMedicine 40 , 595–604 (2019).

DeStefano, F. & Shimabukuro, T. T. The MMR vaccine and autism. Annu. Rev. Virol. 6 , 585–600 (2019).

DeStefano, F., Bodenstab, H. M. & Offit, P. A. Principal controversies in vaccine safety in the United States. Clin. Infect. Dis. 69 , 726–731 (2019).

Moro, P. L., Haber, P. & McNeil, M. M. Challenges in evaluating post-licensure vaccine safety: observations from the Centers for Disease Control and Prevention. Expert Rev. Vaccines 18 , 1091–1101 (2019).

Peck, M. et al. Global routine vaccination coverage, 2018. MMWR Morb. Mortal. Wkly. Rep. 68 , 937–942 (2019).

World Health Organization. Immunization coverage. WHO https://www.who.int/news-room/fact-sheets/detail/immunization-coverage (2020).

World Health Organization. More than 9.4 million children vaccinated against typhoid fever in Sindh. WHO http://www.emro.who.int/pak/pakistan-news/more-than-94-children-vaccinated-with-typhoid-conjugate-vaccine-in-sindh.html (2019).

World Health Organization. More than 140,000 die from measles as cases surge worldwide. WHO https://www.who.int/news-room/detail/05-12-2019-more-than-140-000-die-from-measles-as-cases-surge-worldwide (2019).

World Health Organization. Disease outbreaks. WHO https://www.who.int/emergencies/diseases/en/ (2020).

Rerks-Ngarm, S. et al. Vaccination with ALVAC and AIDSVAX to prevent HIV-1 infection in Thailand. N. Engl. J. Med. 361 , 2209–2220 (2009).

Fauci, A. S., Marovich, M. A., Dieffenbach, C. W., Hunter, E. & Buchbinder, S. P. Immunology. Immune activation with HIV vaccines. Science 344 , 49–51 (2014).

Agnandji, S. T. et al. A phase 3 trial of RTS,S/AS01 malaria vaccine in African infants. N. Engl. J. Med. 367 , 2284–2295 (2012).

Killeen, G. F. et al. Developing an expanded vector control toolbox for malaria elimination. BMJ Glob. Health 2 , e000211 (2017).

Osterholm, M. T., Kelley, N. S., Sommer, A. & Belongia, E. A. Efficacy and effectiveness of influenza vaccines: a systematic review and meta-analysis. Lancet Infect. Dis. 12 , 36–44 (2012).

Skowronski, D. M. et al. Low 2012–13 influenza vaccine effectiveness associated with mutation in the egg-adapted H3N2 vaccine strain not antigenic drift in circulating viruses. PLoS ONE 9 , e92153 (2014).

Raymond, D. D. et al. Conserved epitope on influenza-virus hemagglutinin head defined by a vaccine-induced antibody. Proc. Natl Acad. Sci. USA 115 , 168–173 (2018).

Tameris, M. D. et al. Safety and efficacy of MVA85A, a new tuberculosis vaccine, in infants previously vaccinated with BCG: a randomised, placebo-controlled phase 2b trial. Lancet 381 , 1021–1028 (2013).

Tait, D. R. et al. Final analysis of a trial of M72/AS01(E) vaccine to prevent tuberculosis. N. Engl. J. Med. 381 , 2429–2439 (2019).

Kobayashi, M. et al. WHO consultation on group B streptococcus vaccine development: report from a meeting held on 27–28 April 2016. Vaccine 37 , 7307–7314 (2019).

Inoue, N., Abe, M., Kobayashi, R. & Yamada, S. Vaccine development for cytomegalovirus. Adv. Exp. Med. Biol. 1045 , 271–296 (2018).

Schleiss, M. R., Permar, S. R. & Plotkin, S. A. Progress toward development of a vaccine against congenital cytomegalovirus infection. Clin. Vaccine Immunol. 24 , e00268–e00317 (2017).

CAS   PubMed   PubMed Central   Google Scholar  

World Health Organization. Ageing and health. WHO https://www.who.int/news-room/fact-sheets/detail/ageing-and-health (2018).

Rauch, S., Jasny, E., Schmidt, K. E. & Petsch, B. New vaccine technologies to combat outbreak situations. Front. Immunol. 9 , 1963 (2018).

Jeyanathan, M. et al. Immunological considerations for COVID-19 vaccine strategies. Nat. Rev. Immunol. 20 , 615–632 (2020). This paper is an overview of COVID-19 vaccine development, with emphasis on underlying immunological mechanisms and potential scenarios for global development .

Koff, W. C. & Schenkelberg, T. The future of vaccine development. Vaccine 38 , 4485–4486 (2020).

van Riel, D. & de Wit, E. Next-generation vaccine platforms for COVID-19. Nat. Mater. 19 , 810–812 (2020).

Rollier, C. S., Reyes-Sandoval, A., Cottingham, M. G., Ewer, K. & Hill, A. V. Viral vectors as vaccine platforms: deployment in sight. Curr. Opin. Immunol. 23 , 377–382 (2011).

Corbett, K. S. et al. SARS-CoV-2 mRNA vaccine design enabled by prototype pathogen preparedness. Nature 586 , 567–571 (2020).

Polack, F. P. et al. Safety and efficacy of the BNT162b2 mRNA Covid-19 vaccine. N. Engl. J. Med. https://doi.org/10.1056/NEJMoa2034577 (2020).

Wallis, J., Shenton, D. P. & Carlisle, R. C. Novel approaches for the design, delivery and administration of vaccine technologies. Clin. Exp. Immunol. 196 , 189–204 (2019).

Zhang, C., Maruggi, G., Shan, H. & Li, J. Advances in mRNA vaccines for infectious diseases. Front. Immunol. 10 , 594 (2019).

Pardi, N., Hogan, M. J., Porter, F. W. & Weissman, D. mRNA vaccines — a new era in vaccinology. Nat. Rev. Drug Discov. 17 , 261–279 (2018).

Crank, M. C. et al. A proof of concept for structure-based vaccine design targeting RSV in humans. Science 365 , 505–509 (2019). This paper presents a phase I trial demonstrating enhanced immunogenicity of the pre-F conformation of RSV surface protein, thereby providing a proof of concept for successful structure-based vaccine design .

Mascola, J. R. & Fauci, A. S. Novel vaccine technologies for the 21st century. Nat. Rev. Immunol. 20 , 87–88 (2020).

Kanekiyo, M., Ellis, D. & King, N. P. New vaccine design and delivery technologies. J. Infect. Dis. 219 , S88–S96 (2019).

Peyraud, N. et al. Potential use of microarray patches for vaccine delivery in low- and middle-income countries. Vaccine 37 , 4427–4434 (2019).

Rouphael, N. G. et al. The safety, immunogenicity, and acceptability of inactivated influenza vaccine delivered by microneedle patch (TIV-MNP 2015): a randomised, partly blinded, placebo-controlled, phase 1 trial. Lancet 390 , 649–658 (2017).

Davenport, R. J., Satchell, M. & Shaw-Taylor, L. M. W. The geography of smallpox in England before vaccination: a conundrum resolved. Soc. Sci. Med. 206 , 75–85 (2018).

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Acknowledgements

The authors thank all those whose work in the development, policy and delivery of vaccines underpins immunization programmes to defend our health and the health of our children.

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A.J.P. is Chair of the UK Department of Health and Social Care’s (DHSC) Joint Committee on Vaccination and Immunisation (JCVI), a member of the World Health Organization (WHO) Strategic Advisory Group of Experts on Immunization (SAGE) and a National Institute for Health Research (NIHR) Senior Investigator. The views expressed in this article do not necessarily represent the views of the DHSC, JCVI, NIHR or WHO. E.M.B. declares no competing interests. Oxford University has entered into a partnership with AstraZeneca for the development of a viral vectored coronavirus vaccine.

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Supplementary information

Supplementary information.

Parts of the pathogen (such as proteins or polysaccharides) that are recognized by the immune system and can be used to induce an immune response by vaccination.

The state in which an individual does not develop disease after being exposed to a pathogen.

A reduction in the virulence of a pathogen (through either deliberate or natural changes in virulence genes).

Particles constructed of viral proteins that structurally mimic the native virus but lack the viral genome.

An agent used in a vaccine to enhance the immune response against the antigen.

Molecules that stimulate a more robust immune response together with an antigen. Endogenous mediators that are released in response to infection or injury and that interact with pattern recognition receptors such as Toll-like receptors to activate innate immune cells such as dendritic cells.

The evolutionarily primitive part of the immune system that detects foreign antigens in a non-specific manner.

A liposome-based adjuvant containing 3- O -desacyl-4′-monophosphoryl lipid A and the saponin QS-21. AS01 triggers the innate immune system immediately after vaccination, resulting in an enhanced adaptive immune response.

An adjuvant consisting of aluminium salt and the Toll-like receptor agonist monophosphoryl lipid A.

A network of proteins that form an important part of the immune response by enhancing the opsonization of pathogens, cell lysis and inflammation.

A state of a pathogen in which antibodies or complement factors are bound to its surface.

Antibodies that bind to a pathogen, which subsequently can be eliminated by phagocytosis.

Antigens against which B cells can mount an antibody response without T cell help.

An antigen for which T cell help is required in order for B cells to mount an antibody response.

Studies in which volunteers are deliberately infected with a pathogen, in a carefully conducted study, to evaluate the biology of infection and the efficacy of drugs and vaccines.

The capacity of the immune system to respond quicker and more effectively when a pathogen is encountered again after an initial exposure that induced antigen-specific B cells and T cells.

The period from acquisition of a pathogen to the development of symptomatic disease.

Repeat administration of a vaccine after an initial priming dose, given in order to enhance the immune response.

An assay in which blood is stimulated with Mycobacterium tuberculosis antigens, after which levels of interferon-γ (produced by specific memory T cells if these are present) are measured.

Changes in the expression of genes that do not result from changes in DNA sequence.

A severe and potentially life-threatening reaction to an allergen.

Vaccines that are administered by means avoiding the gastrointestinal tract (for example, by intramuscular, subcutaneous or intradermal routes).

An acquired autoimmune condition characterized by low levels of platelets in the blood caused by antibodies to platelet antigens.

A rare chronic sleep disorder characterized by extreme sleepiness during the day and sudden sleep attacks.

Vaccines that are intended for a limited scope or targeting infections that are rare, as a result of which development costs exceed their market potential.

Blebs made from the outer membrane of Gram-negative bacteria, containing the surface proteins and lipids of the organism in the membrane.

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Pollard, A.J., Bijker, E.M. A guide to vaccinology: from basic principles to new developments. Nat Rev Immunol 21 , 83–100 (2021). https://doi.org/10.1038/s41577-020-00479-7

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Simply put: Vaccination saves lives

Walter a. orenstein.

a Department of Medicine, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA, 30322;

b Department of Microbiology & Immunology, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA, 30322

Author contributions: W.A.O. and R.A. wrote the paper.

Few measures in public health can compare with the impact of vaccines. Vaccinations have reduced disease, disability, and death from a variety of infectious diseases. For example, in the United States, children are recommended to be vaccinated against 16 diseases ( 1 ). Table 1 highlights the impact in the United States of immunization against nine vaccine-preventable diseases, including smallpox and a complication of one of those diseases, congenital rubella syndrome, showing representative annual numbers of cases in the 20th century compared with 2016 reported cases ( 2 , 3 ). All of the diseases have been reduced by more than 90% and many have either been eliminated or reductions of 99% or more have been achieved. A recent analysis of vaccines to protect against 13 diseases estimated that for a single birth cohort nearly 20 million cases of diseases were prevented, including over 40,000 deaths ( 4 ). In addition to saving the lives of our children, vaccination has resulted in net economic benefits to society amounting to almost $69 billion in the United States alone. A recent economic analysis of 10 vaccines for 94 low- and middle-income countries estimated that an investment of $34 billion for the immunization programs resulted in savings of $586 billion in reducing costs of illness and $1.53 trillion when broader economic benefits were included ( 5 ). The only human disease ever eradicated, smallpox, was eradicated using a vaccine, and a second, polio, is near eradication, also using vaccines ( 6 , 7 ).

Comparison of 20th century annual morbidity and current estimates vaccine-preventable diseases

Disease20th Century annual morbidity ( )2016 Reported cases ( )Percent decrease (%)
Smallpox29,0050100
Diphtheria21,0530100
Measles530,21769>99
Mumps162,3445,31197
Pertussis200,75215,73792
Polio (paralytic)16,3160100
Rubella47,7455>99
Congenital rubella syndrome152199
Tetanus5803394
20,00022 >99

Vaccines not only provide individual protection for those persons who are vaccinated, they can also provide community protection by reducing the spread of disease within a population ( Fig. 1 ). Person-to-person infection is spread when a transmitting case comes in contact with a susceptible person. If the transmitting case only comes in contact with immune individuals, then the infection does not spread beyond the index case and is rapidly controlled within the population. Interestingly, this chain of human-to-human transmission can be interrupted, even if there is not 100% immunity, because transmitting cases do not have infinite contacts; this is referred to as “herd immunity” or “community protection,” and is an important benefit of vaccination.

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Object name is pnas.1704507114fig01.jpg

( A ) A highly susceptible population in which a transmitting case is likely to come in contact with a susceptible person leading to a chain of person-to-person transmission. ( B ) A highly immune population in which a transmitting case is unlikely to come in contact with a susceptible person, thereby breaking the chain of transmission and achieving indirect protection of remaining susceptibles because they are not exposed.

Mathematical modelers can estimate on average how many persons the typical transmitting case is capable of infecting if all of the contacts were susceptible (i.e., a population of 100% susceptibility). This number is known as R 0 , or the basic reproductive number. The immunity threshold needed within the population for terminating transmission can be calculated in percent as ( R 0 − 1)/ R 0 × 100 and is a guide to setting immunity levels and vaccination coverage targets for various diseases ( 8 ). For example, measles is one of the most contagious of vaccine-preventable diseases, with an estimated immunity threshold of 92–94%. In contrast, the protection threshold for rubella is estimated at 83–85%. Thus, eliminating rubella transmission is easier than measles, and when there are gaps in immunization coverage leading to accumulation of susceptibles, measles is often the first vaccine-preventable disease identified. Because of community protection induced by vaccines, persons who cannot be vaccinated (e.g., have contraindications or are younger than the age for whom vaccines are recommended), as well as persons who fail to make an adequate immune response to the vaccine (although most vaccines are highly effective, they are not 100% effective), can be protected indirectly because they are not exposed ( Fig. 1 ). Thus, for most vaccines, achieving high levels of coverage is important not only for individual protection but in preventing disease in vulnerable populations that cannot be directly protected by vaccination. This provides the rationale for interventions to achieve high population immunity, such as removing barriers that may prevent access to vaccines (e.g., providing recommended vaccines without cost), as well as mandates for immunization requirements for attending school ( 9 ). There are many reasons why vaccinations may not be received as recommended. One extreme is outright opposition to vaccines. Probably even more common may be that making the effort to receive vaccines (e.g., making the healthcare visits at the appropriate time so vaccines can be administered) may be a low priority compared with other issues, so in the absence of having a mandate for vaccination, other things take priority. Thus, appropriate mandates could help in making vaccination a priority for all ( 10 ).

It’s often said that vaccines save lives, but this is not strictly true; it is vaccination that saves lives. A vaccine that remains in the vial is 0% effective even if it is the best vaccine in the world. Thus, it is imperative that we all work together to assure that a high level of coverage is obtained among populations for whom vaccines are recommended. In some sense, vaccines have become victims of their own success. Diseases that once induced fear and sparked desire for vaccines are now rare, and there is a false and dangerous sense of complacency among the public.

In addition, in recent years, growing numbers of persons have become hesitant about vaccines, fearing side effects and not appreciative of the enormous health and economic benefits that vaccines provide. A CDC report on 159 measles cases reported between January 4 and April 2, 2015, showed that 68 United States residents with measles were unvaccinated, and of these 29 (43%) cited philosophical or religious objections to vaccination ( 11 ). A 2014 national web-based poll of parents in the United States estimated that 90.8% (89.3–92.1%) reported accepting or planning to accept all recommended noninfluenza childhood vaccines, 5.6% (4.6–6.9%) reported intentionally delaying one or more, and 3.6% (2.8–4.5%) reported refusing one or more vaccines ( 12 ). A national survey of pediatricians in the United States reported that the proportion of pediatricians reporting parental vaccine refusals increased from 74.5% in 2006 to 87.0% in 2013 ( 13 ). A 67-country survey on the state of vaccine confidence reported an average of 5.8% of respondents globally were skeptical about the importance of vaccines, with that proportion rising to more than 15% in some countries ( 14 ). One of the major concerns in recent years has been the allegations that vaccines can cause autism. There are three major theories advanced on the role of vaccines in causing autism: ( i ) measles, mumps, rubella vaccine (MMR); ( ii ) thimerosal, an ethyl mercury containing preservative in many vaccines in the United States in the past, now mostly out of vaccines recommended for children; and ( iii ) too many vaccines ( 15 ). There have been multiple well-conducted studies and independent reviews of those studies by the Institute of Medicine (now the National Academy of Medicine) that do not support a role for vaccines in causing autism ( 16 ). Independent evaluation of the safety of the immunization schedule has found it to be extremely safe ( 17 ). However, translating the science into information capable of influencing vaccine skeptics has been difficult.

The National Vaccine Advisory Committee (NVAC) in the United States issued a report in 2015, with 23 recommendations to assure high levels of vaccine confidence ( 18 ). The recommendations have five focus areas: ( i ) measuring and tracking vaccine confidence, ( ii ) communication and community strategies to increase vaccine confidence, ( iii ) healthcare provider strategies to increase vaccine confidence, ( iv ) policy strategies to increase vaccine confidence, and ( v ) continued support and monitoring of the state of vaccine confidence. Critical to assuring confidence is evidence-based research to evaluate which interventions are most effective. The NVAC recommended that a repository of evidence-based best practices for informing, educating, and communicating with parents and others in ways that foster or increase vaccine confidence be created. And while we have focused on children, vaccine preventable diseases exact a substantial health burden in adults and immunization coverage rates for most recommended vaccines are substantially lower for adults than those achieved for recommended vaccines in children. Thus, there is need not only in enhancing immunization rates in children but also in adults.

In summary, vaccines are some of the most effective and also cost-effective prevention tools we have. But vaccines that are not administered to persons for whom they are recommended are not useful. It is incumbent upon all of us who work in the healthcare setting, as well as community leaders, to stress to our friends and colleagues the importance of vaccination both for the individual vaccinated as well as for the communities in which the individuals live. Also critically important, there remains an urgent need for greater emphasis on research to develop vaccines for global diseases for which vaccines either do not exist or need improvement.

Acknowledgments

The authors thank Dianne Miller, Ali Ellebedy, and Sandra Roush for their assistance in preparation of the manuscript.

See Perspective on page 4055 .

IMAGES

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